MirGeneDB ID | Npo-Mir-76 |
---|---|
Family name | MIR-76 (all species) |
Seed | UCGUUGU |
Species | Chambered Nautilus (Nautilus pompilius) |
MiRBase ID | |
Paralogues | |
Orthologues | Aae-Mir-76 Aga-Mir-76 Agr-Mir-76 Asu-Mir-76 Ava-Mir-76-P11 Ava-Mir-76-P12 Bge-Mir-76 Bko-Mir-76 Bpl-Mir-76 Cbr-Mir-76 Cel-Mir-76 Csc-Mir-76-P10a Csc-Mir-76-P10b Cte-Mir-76 Dan-Mir-76 Dgr-Mir-76 Dlo-Mir-76 Dma-Mir-76 Dme-Mir-76 Dmo-Mir-76 Dpu-Mir-76 Dsi-Mir-76 Dya-Mir-76 Eba-Mir-76 Efe-Mir-76 Esc-Mir-76 Gpa-Mir-76 Gsa-Mir-76 Hme-Mir-76 Hru-Mir-76 Isc-Mir-76 Lan-Mir-76-P1 Lan-Mir-76-P2 Lgi-Mir-76 Llo-Mir-76 Lpo-Mir-76-P3 Lpo-Mir-76-P4 Lpo-Mir-76-P5 Lpo-Mir-76-P6 Lpo-Mir-76-P7 Lpo-Mir-76-P8 Mgi-Mir-76 Mom-Mir-76 Obi-Mir-76 Ofu-Mir-76 Ovu-Mir-76 Pau-Mir-76 Pcr-Mir-76 Pdu-Mir-76 Pmi-Mir-76 Pve-Mir-76 Rph-Mir-76 Sma-Mir-76 Sme-Mir-76-P9a Sme-Mir-76-P9b Snu-Mir-76 Spu-Mir-76 Tca-Mir-76 Tur-Mir-76 War-Mir-76 |
Node of Origin (locus) | Nephrozoa |
Node of Origin (family) | Nephrozoa |
Genome context (GCA_018389105_NPO) |
JACATO010001886.1: 50169-50231 [+] Ensembl |
Precursor (pre-Mir +30nt flank) | GGACCGCGGGCGGGCAGGUGAGCUAUUUUGACGGGUUUCGCGAUAUGCGAACAAUAAAUUGCAAAAACUGUUCGUUGUCGAUGAAACCUGCCUGAAAUAGUGAGCCGAGUCACGUCAGCGGAGGet precursor sequence |
Structure | 10 20 30 40 50 60 GGACCGCGGGCGGGCAG- GA A- -| U AUAAAUU GU GCUAUUUUG CGGGUUUCG CGAUA GCGAACA \ CG UGAUAAAGU GUCCAAAGU GCUGU UGCUUGU G GAGGCGACUGCACUGAGC AG CC A^ - CAAAAAC 120 110 100 90 80 70 |
Deep sequencing | |
3' NTU | Unknown |
Motifs | No |
Star sequence | Npo-Mir-76_5p* (predicted) |
mirBase accession | None |
Sequence |
0- ACGGGUUUCGCGAUAUGCGAACA -23
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|
Mature sequence | Npo-Mir-76_3p (predicted) |
mirBase accession | None |
Sequence |
40- UUCGUUGUCGAUGAAACCUGCCU -63
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|