MirGeneDB 2.1

MirGeneDB ID

Cbr-Mir-76

Family name MIR-76 (all species)
Seed UCGUUGU
Species Roundworm (Caenorhabditis briggsae)
MiRBase ID cbr-mir-76
Paralogues
Orthologues Aae-Mir-76  Asu-Mir-76  Bge-Mir-76  Bpl-Mir-76  Cel-Mir-76  Cgi-Mir-76  Cte-Mir-76  Dan-Mir-76  Dma-Mir-76  Dme-Mir-76  Dmo-Mir-76  Dpu-Mir-76  Dsi-Mir-76  Dya-Mir-76  Efe-Mir-76  Esc-Mir-76  Hme-Mir-76  Isc-Mir-76  Lan-Mir-76-P1  Lan-Mir-76-P2  Lgi-Mir-76  Lpo-Mir-76-P3  Lpo-Mir-76-P4  Lpo-Mir-76-P5  Lpo-Mir-76-P6  Lpo-Mir-76-P7  Lpo-Mir-76-P8  Npo-Mir-76  Obi-Mir-76  Ovu-Mir-76  Pmi-Mir-76  Sme-Mir-76-P9a  Sme-Mir-76-P9b  Spu-Mir-76  Tca-Mir-76 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(CB4)
III: 2936468-2936529 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
GUUUGUCUUAAAAUCCCUCAUUCGCCAAUUAGGACUUCACAACAUGCGAAUACCACCACUUCUAUGGAUAUUCGUUGUUGAUGAAGUCUUAAUGGACGUCUGCGGGGUCCAGGUUUGAAGUG
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Structure
        10          20         30         40        50        60
GUUUGUCUUAAAAUCCCU--  UU  -|  A           -     U       CCACCAC 
                    CA  CG CCA UUAGGACUUCA CAACA GCGAAUA       U
                    GU  GC GGU AAUUCUGAAGU GUUGU UGCUUAU       U
GUGAAGUUUGGACCUGGGGC  CU  A^  -           A     -       AGGUAUC 
120       110       100         90        80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
01 02 03 04 05 06 07 08 09 10 11 12 13 14 15 16 Cb Ea Ma Yo
Star sequence

Cbr-Mir-76_5p*

mirBase accessionNone
Sequence
0- AGGACUUCACAACAUGCGAAUA -22
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Mature sequence

Cbr-Mir-76_3p

mirBase accessionMIMAT0011466
Sequence
40- UUCGUUGUUGAUGAAGUCUUAA -62
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