MirGeneDB ID | Cbr-Mir-76 |
Family name |
MIR-76 (all species) |
Seed |
UCGUUGU |
Species |
Roundworm (Caenorhabditis briggsae) |
MiRBase ID |
cbr-mir-76
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Paralogues |
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Orthologues |
Aae-Mir-76
Asu-Mir-76
Bge-Mir-76
Bpl-Mir-76
Cel-Mir-76
Cgi-Mir-76
Cte-Mir-76
Dan-Mir-76
Dma-Mir-76
Dme-Mir-76
Dmo-Mir-76
Dpu-Mir-76
Dsi-Mir-76
Dya-Mir-76
Efe-Mir-76
Esc-Mir-76
Hme-Mir-76
Isc-Mir-76
Lan-Mir-76-P1
Lan-Mir-76-P2
Lgi-Mir-76
Lpo-Mir-76-P3
Lpo-Mir-76-P4
Lpo-Mir-76-P5
Lpo-Mir-76-P6
Lpo-Mir-76-P7
Lpo-Mir-76-P8
Npo-Mir-76
Obi-Mir-76
Ovu-Mir-76
Pmi-Mir-76
Sme-Mir-76-P9a
Sme-Mir-76-P9b
Spu-Mir-76
Tca-Mir-76
|
Node of Origin (locus) |
Bilateria
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Node of Origin (family) |
Bilateria
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Genome context (CB4) |
III: 2936468-2936529 [-]
Ensembl
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Precursor (pre-Mir +30nt flank) |
GUUUGUCUUAAAAUCCCUCAUUCGCCAAUUAGGACUUCACAACAUGCGAAUACCACCACUUCUAUGGAUAUUCGUUGUUGAUGAAGUCUUAAUGGACGUCUGCGGGGUCCAGGUUUGAAGUG
Get precursor sequence
|
Structure | 10 20 30 40 50 60
GUUUGUCUUAAAAUCCCU-- UU -| A - U CCACCAC
CA CG CCA UUAGGACUUCA CAACA GCGAAUA U
GU GC GGU AAUUCUGAAGU GUUGU UGCUUAU U
GUGAAGUUUGGACCUGGGGC CU A^ - A - AGGUAUC
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
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Motifs | No |
Tissue expression
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01 |
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Cb |
Ea |
Ma |
Yo |
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Star sequence |
Cbr-Mir-76_5p* |
mirBase accession | None |
Sequence |
0- AGGACUUCACAACAUGCGAAUA -22
Get sequence
|
Mature sequence |
Cbr-Mir-76_3p |
mirBase accession | MIMAT0011466 |
Sequence |
40- UUCGUUGUUGAUGAAGUCUUAA -62
Get sequence
|