| MirGeneDB ID | Asu-Mir-76 |
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| Family name |
MIR-76 (all species) |
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| Seed |
UCGUUGU |
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| Species |
Large roundworm (Ascaris suum) |
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| MiRBase ID |
asu-mir-76
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| Paralogues |
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| Orthologues |
Aae-Mir-76
Bge-Mir-76
Bpl-Mir-76
Cbr-Mir-76
Cel-Mir-76
Cgi-Mir-76
Cte-Mir-76
Dan-Mir-76
Dma-Mir-76
Dme-Mir-76
Dmo-Mir-76
Dpu-Mir-76
Dsi-Mir-76
Dya-Mir-76
Efe-Mir-76
Esc-Mir-76
Hme-Mir-76
Isc-Mir-76
Lan-Mir-76-P1
Lan-Mir-76-P2
Lgi-Mir-76
Lpo-Mir-76-P3
Lpo-Mir-76-P4
Lpo-Mir-76-P5
Lpo-Mir-76-P6
Lpo-Mir-76-P7
Lpo-Mir-76-P8
Npo-Mir-76
Obi-Mir-76
Ovu-Mir-76
Pmi-Mir-76
Sme-Mir-76-P9a
Sme-Mir-76-P9b
Spu-Mir-76
Tca-Mir-76
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| Node of Origin (locus) |
Bilateria
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| Node of Origin (family) |
Bilateria
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Genome context
(ASU_PRJNA80881_plustraces) |
Scaffold25: 1298666-1298724 [+]
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Precursor
(pre-Mir +30nt flank) |
AUUUCCCCCGCCUAGAUGGCCGCUGGCUGGUCGGGUUUUCUAUCAGCGAAUAUUUCGCUGAAAUUAUUCGUUGUUUAUGAAACCUGCUUAGCCGGUUGCCUUCUUUCCCCCUCCCCUUG
Get precursor sequence
|
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| Structure | 10 20 30 40 50
AUUUCCCCCGCCUAGAU-- C U C U-| UUUCG
GGC GCUGGCUGG CGGGUUUU UA CAGCGAAUA C
CCG UGGCCGAUU GUCCAAAG AU GUUGCUUAU U
GUUCCCCUCCCCCUUUCUU U C U UU^ UAAAG
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
|
| 0h |
11 |
12 |
24 |
46 |
64 |
6d |
7d |
8d |
96 |
Em |
La |
Ov |
Se |
Sp |
Te |
Zy |
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| Star sequence |
Asu-Mir-76_5p* |
| mirBase accession | MIMAT0021470 |
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| Sequence |
0- UCGGGUUUUCUAUCAGCGAAUA -22
Get sequence
|
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| Mature sequence |
Asu-Mir-76_3p |
| mirBase accession | MIMAT0021471 |
|---|
| Sequence |
36- UUCGUUGUUUAUGAAACCUGCUU -59
Get sequence
|
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