MirGeneDB ID | Ava-Mir-76-P12 |
Family name |
MIR-76 (all species) |
Seed |
UCGUUGU |
Species |
Bdelloid rotifer (Adineta vaga) |
MiRBase ID |
|
Paralogues |
Ava-Mir-76-P11
|
Orthologues |
Aae-Mir-76
Aga-Mir-76
Agr-Mir-76
Asu-Mir-76
Bge-Mir-76
Bko-Mir-76
Bpl-Mir-76
Cbr-Mir-76
Cel-Mir-76
Cte-Mir-76
Dan-Mir-76
Dgr-Mir-76
Dlo-Mir-76
Dma-Mir-76
Dme-Mir-76
Dmo-Mir-76
Dpu-Mir-76
Dsi-Mir-76
Dya-Mir-76
Eba-Mir-76
Efe-Mir-76
Esc-Mir-76
Gpa-Mir-76
Gsa-Mir-76
Hme-Mir-76
Hru-Mir-76
Isc-Mir-76
Lgi-Mir-76
Llo-Mir-76
Mgi-Mir-76
Mom-Mir-76
Npo-Mir-76
Obi-Mir-76
Ofu-Mir-76
Ovu-Mir-76
Pau-Mir-76
Pcr-Mir-76
Pdu-Mir-76
Pmi-Mir-76
Pve-Mir-76
Rph-Mir-76
Sma-Mir-76
Snu-Mir-76
Spu-Mir-76
Tca-Mir-76
Tur-Mir-76
War-Mir-76
|
Node of Origin (locus) |
A. vaga
|
Node of Origin (family) |
Nephrozoa
|
Genome context (GCA_021613535.1_ASM2161353v1_AVA) |
CP075494.1: 14116290-14116351 [-]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
UAAAACAAACUAUUUUAUAGUCUAUAAGUGCAGGUUUUGUUGAUAAUUCGGACAUUGAUUUUCUUAUUUGUUCGUUGUCGUCAAAACCUGUAUUGAACGGGCAUACUAAUUAACUUCAUCUA
Get precursor sequence
|
Structure | 10 20 30 40 50 60
UAAAACAAACUAUUUUAUA- AUA-| U UU UUGAUU
GUCU AGUGCAGGUUUUG UGAUAA CGGACA U
CGGG UUAUGUCCAAAAC GCUGUU GCUUGU U
AUCUACUUCAAUUAAUCAUA CAAG^ U -- UUAUUC
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Star sequence |
Ava-Mir-76-P12_5p* |
mirBase accession | None |
Sequence |
0- CAGGUUUUGUUGAUAAUUCGGACA -24
Get sequence
|
Mature sequence |
Ava-Mir-76-P12_3p |
mirBase accession | None |
Sequence |
40- UUCGUUGUCGUCAAAACCUGUA -62
Get sequence
|