MirGeneDB 3.0
MirGeneDB ID

Sme-Mir-76-P9a

Family name MIR-76 (all species)
Seed UCGUUGU
Species Freshwater planarian (Schmidtea mediterranea)
MiRBase ID sme-mir-76
Paralogues Sme-Mir-76-P9b 
Orthologues Aae-Mir-76  Aga-Mir-76  Agr-Mir-76  Asu-Mir-76  Bge-Mir-76  Bko-Mir-76  Bpl-Mir-76  Cbr-Mir-76  Cel-Mir-76  Cte-Mir-76  Dan-Mir-76  Dgr-Mir-76  Dlo-Mir-76  Dma-Mir-76  Dme-Mir-76  Dmo-Mir-76  Dpu-Mir-76  Dsi-Mir-76  Dya-Mir-76  Eba-Mir-76  Efe-Mir-76  Esc-Mir-76  Gpa-Mir-76  Gsa-Mir-76  Hme-Mir-76  Hru-Mir-76  Isc-Mir-76  Lgi-Mir-76  Llo-Mir-76  Mgi-Mir-76  Mom-Mir-76  Npo-Mir-76  Obi-Mir-76  Ofu-Mir-76  Ovu-Mir-76  Pau-Mir-76  Pcr-Mir-76  Pdu-Mir-76  Pmi-Mir-76  Pve-Mir-76  Rph-Mir-76  Sma-Mir-76  Snu-Mir-76  Spu-Mir-76  Tca-Mir-76  Tur-Mir-76  War-Mir-76 
Node of Origin (locus) S. mediterranea
Node of Origin (family) Nephrozoa
Genome context
(Sme_GCA_002600895.1_ASM260089v1_alt)		 NNSW01000064_dd_Smes_g4_64: 2635469-2635533 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-76-P9a)		 Mir-76-P9a NNSW01000064_dd_Smes_g4_64: 2635469-2635533 [+] UCSC Ensembl
Mir-76-P9b NNSW01000064_dd_Smes_g4_64: 2647535-2647599 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAAAGGUUUUUGUUUUUUUUUGAUAAACAUUUUUCAUUCUUAAACAAUGAAUAGUUUUUCCAUGACAAAGUAUUCGUUGUUUAUGAAUGAGAGAAAUGUUAGCAUUUAUCCUCGUAUCUUUAUCU
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Structure
        10        20        30          40        50        60  
CAAAGGUUUUUGUUUUUUUUUGAUA        --|     U             GUUUUUCC 
                         AACAUUUU  UCAUUC UAAACAAUGAAUA        \
                         UUGUAAAG  AGUAAG AUUUGUUGCUUAU        A
UCUAUUUCUAUGCUCCUAUUUACGA        AG^     U             GAAACAGU 
   120       110       100        90        80        70
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
-   +
Ag Ag Di Gf Ne Ph Se Se Se Se Se Se Se Se Se Se Se Wh Wh Wh
Star sequence

Sme-Mir-76-P9a_5p* (predicted)
mirBase accessionMIMAT0011396
Sequence 
0- UUUUCAUUCUUAAACAAUGAAUA -23
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Mature sequence

Sme-Mir-76-P9a_3p
mirBase accessionMIMAT0011397
Sequence 
42- UUCGUUGUUUAUGAAUGAGAGAA -65
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