MirGeneDB 3.0
99 microRNA genes with node of origin S. mediterranea
Sort by genome coordinates Motifs
MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC
Sme-Bantam-P18 sme-bantam-a BANTAM GAGAUCA None MIMAT0003949 NNSW01000048_dd_Smes_g4_48 1523214 1523273 - S. mediterranea Protostomia No 1
Sme-Bantam-P19 sme-bantam-b BANTAM GAGAUCA MIMAT0012085 MIMAT0003950 NNSW01000024_dd_Smes_g4_24 5777402 5777455 + S. mediterranea Protostomia No
Sme-Bantam-P20 sme-bantam-c-1 BANTAM GAGAUCA MIMAT0012086 MIMAT0003951 NNSW01000102_dd_Smes_g4_102 1106013 1106065 - S. mediterranea Protostomia No 1
Sme-Let-7-P19a sme-let-7a LET-7 GAGGUAG MIMAT0003952 MIMAT0012087 NNSW01000140_dd_Smes_g4_140 55435 55501 + S. mediterranea Bilateria No 1
Sme-Let-7-P19b sme-let-7a LET-7 GAGGUAG MIMAT0003952 MIMAT0012087 NNSW01000140_dd_Smes_g4_140 182795 182861 + S. mediterranea Bilateria No 1
Sme-Let-7-P20a sme-let-7b LET-7 GAGGUAG MIMAT0003953 MIMAT0003954 NNSW01000450_dd_Smes_g4_450 57961 58016 - S. mediterranea Bilateria No 1
Sme-Let-7-P20b sme-let-7b LET-7 GAGGUAG MIMAT0003953 MIMAT0003954 NNSW01000045_dd_Smes_g4_45 2341596 2341651 - S. mediterranea Bilateria No 1
Sme-Let-7-P21 sme-let-7c LET-7 GAGGUAG MIMAT0003955 MIMAT0012088 NNSW01000016_dd_Smes_g4_16 3109644 3109714 - S. mediterranea Bilateria Unknown
Sme-Let-7-P22 sme-let-7d LET-7 GAGGUAG MIMAT0011225 None NNSW01000007_dd_Smes_g4_7 6243474 6243532 + S. mediterranea Bilateria No 1
Sme-Mir-1-P24 sme-mir-1a MIR-1 GGAAUGU MIMAT0012090 MIMAT0003960 NNSW01000005_dd_Smes_g4_5 4406441 4406506 + S. mediterranea Bilateria No 1 1
Sme-Mir-1-P25 sme-mir-1b MIR-1 GGAAUGU MIMAT0012091 MIMAT0003961 NNSW01000241_dd_Smes_g4_241 658560 658620 - S. mediterranea Bilateria No 1
Sme-Mir-1-P26 sme-mir-1c MIR-1 GGAAUGU MIMAT0012092 MIMAT0003962 NNSW01000241_dd_Smes_g4_241 653765 653818 - S. mediterranea Bilateria Yes 1
Sme-Mir-2-o122a sme-mir-2a-1 MIR-2 AUCACAG MIMAT0003964 MIMAT0003963 NNSW01000035_dd_Smes_g4_35 577882 577946 + S. mediterranea Protostomia No
Sme-Mir-2-o122b sme-mir-2a-2 MIR-2 AUCACAG MIMAT0012093 MIMAT0003963 NNSW01000001_dd_Smes_g4_1 13481745 13481799 + S. mediterranea Protostomia No 1
Sme-Mir-2-o123 sme-mir-2d MIR-2 CAUCAUU MIMAT0012095 MIMAT0003968 NNSW01000131_dd_Smes_g4_131 1191304 1191374 + S. mediterranea Protostomia No 1
Sme-Mir-2-o124 sme-mir-752 MIR-2 CUCCAAA MIMAT0012125 MIMAT0004019 NNSW01000131_dd_Smes_g4_131 1191422 1191481 + S. mediterranea Protostomia No
Sme-Mir-2-o125 sme-mir-13 MIR-2 AUCACAG MIMAT0012101 MIMAT0003976 NNSW01000131_dd_Smes_g4_131 1191539 1191598 + S. mediterranea Protostomia No 1
Sme-Mir-2-o126 sme-mir-2c MIR-2 UCAUCAA MIMAT0012094 MIMAT0003967 NNSW01000006_dd_Smes_g4_6 2195588 2195642 + S. mediterranea Protostomia No 1
Sme-Mir-2-o127 sme-mir-2f MIR-2 UCUGAAG MIMAT0011410 MIMAT0011411 NNSW01000025_dd_Smes_g4_25 5887622 5887680 + S. mediterranea Protostomia No 1
Sme-Mir-2-o128 sme-mir-2e MIR-2 AUCACAG MIMAT0011400 MIMAT0011401 NNSW01000025_dd_Smes_g4_25 5887731 5887790 + S. mediterranea Protostomia No
Sme-Mir-2-o129 sme-mir-2b MIR-2 CACAGCC MIMAT0003965 MIMAT0003966 NNSW01000014_dd_Smes_g4_14 3096425 3096480 + S. mediterranea Protostomia Yes 1
Sme-Mir-7-P20 sme-mir-7a MIR-7 GGAAGAC MIMAT0003969 MIMAT0012096 NNSW01000009_dd_Smes_g4_9 6662373 6662434 + S. mediterranea Bilateria No 1
Sme-Mir-7-P21 sme-mir-7b MIR-7 GGAAGAC MIMAT0003970 MIMAT0012097 NNSW01000037_dd_Smes_g4_37 3421445 3421511 - S. mediterranea Bilateria No 1
Sme-Mir-7-P22 sme-mir-7c MIR-7 GGAAGAC MIMAT0003971 MIMAT0012098 NNSW01000062_dd_Smes_g4_62 2478807 2478862 + S. mediterranea Bilateria Unknown
Sme-Mir-7-P23 sme-mir-7d MIR-7 GGAAGAC MIMAT0011253 MIMAT0012151 NNSW01000075_dd_Smes_g4_75 971164 971248 - S. mediterranea Bilateria Unknown 1
Sme-Mir-8-P14 sme-mir-8a MIR-8 AAUACUG MIMAT0012099 MIMAT0003972 NNSW01000053_dd_Smes_g4_53 2041048 2041111 - S. mediterranea Nephrozoa No 1
Sme-Mir-8-P15 sme-mir-8b MIR-8 AAUACUG MIMAT0012139 MIMAT0011240 NNSW01000077_dd_Smes_g4_77 1841779 1841834 + S. mediterranea Nephrozoa No 1
Sme-Mir-9-P28 sme-mir-9a MIR-9 CUUUGGU MIMAT0011248 MIMAT0012146 NNSW01000020_dd_Smes_g4_20 3968660 3968723 - S. mediterranea Bilateria No 1
Sme-Mir-9-P29 sme-mir-9b MIR-9 CUUUGGU MIMAT0011247 MIMAT0012145 NNSW01000025_dd_Smes_g4_25 1299427 1299482 + S. mediterranea Bilateria No 1
Sme-Mir-9-P30 sme-mir-79 MIR-9 UAAAGCU MIMAT0012108 MIMAT0003988 NNSW01000017_dd_Smes_g4_17 1530998 1531058 - S. mediterranea Bilateria No 1
Sme-Mir-10-P1s sme-mir-10a MIR-10 ACCCUGU MIMAT0011223 MIMAT0012130 NNSW01000001_dd_Smes_g4_1 11242782 11242835 + S. mediterranea Eumetazoa No
Sme-Mir-10-P1t sme-mir-10b MIR-10 ACCCUGU MIMAT0003973 MIMAT0003974 NNSW01000031_dd_Smes_g4_31 3745155 3745232 + S. mediterranea Eumetazoa Yes 1
Sme-Mir-10-P3s sme-mir-125a MIR-10 CCCUGAG MIMAT0003996 MIMAT0003997 NNSW01000015_dd_Smes_g4_15 6805749 6805809 + S. mediterranea Eumetazoa No 1 1
Sme-Mir-10-P3t sme-mir-125b MIR-10 CCCUGAG MIMAT0003998 MIMAT0012114 NNSW01000057_dd_Smes_g4_57 685972 686034 - S. mediterranea Eumetazoa No 1
Sme-Mir-12-P9 sme-mir-12 MIR-12 GAGUAUU MIMAT0003975 MIMAT0012100 NNSW01000015_dd_Smes_g4_15 155743 155813 - S. mediterranea Protostomia No 1
Sme-Mir-12-P10 sme-mir-2157 MIR-12 GAGUAUU MIMAT0011250 MIMAT0012148 NNSW01000085_dd_Smes_g4_85 414521 414575 + S. mediterranea Protostomia Unknown
Sme-Mir-12-P11 sme-mir-2158 MIR-12 GAGUAUU MIMAT0011251 MIMAT0012149 NNSW01000007_dd_Smes_g4_7 5199085 5199146 + S. mediterranea Protostomia Yes 1
Sme-Mir-29-o2 sme-mir-746 MIR-29 AGCACCA MIMAT0012103 MIMAT0003978 NNSW01000203_dd_Smes_g4_203 962314 962399 + S. mediterranea Bilateria No 1
Sme-Mir-31-P19 sme-mir-31a MIR-31 GGCAAGA MIMAT0003979 MIMAT0012104 NNSW01000098_dd_Smes_g4_98 1507690 1507758 - S. mediterranea Bilateria No 1
Sme-Mir-31-P20 sme-mir-31b-1 MIR-31 GGCAAGA MIMAT0003980 MIMAT0011413 NNSW01000043_dd_Smes_g4_43 2461898 2461958 - S. mediterranea Bilateria No 1
Sme-Mir-36-P19 sme-mir-36b MIR-36 CACCGGG MIMAT0012141 MIMAT0011242 NNSW01000045_dd_Smes_g4_45 2342053 2342111 - S. mediterranea Protostomia No
Sme-Mir-36-P20a sme-mir-36c MIR-36 CACCGGG MIMAT0012158 MIMAT0011261 NNSW01000019_dd_Smes_g4_19 7234307 7234370 + S. mediterranea Protostomia No 1 1
Sme-Mir-36-P20b sme-mir-36a MIR-36 CACCGGG MIMAT0003981 MIMAT0003982 NNSW01000019_dd_Smes_g4_19 7234834 7234895 + S. mediterranea Protostomia No 1
Sme-Mir-71-o1a sme-mir-71a-1 MIR-71 GAAAGAC MIMAT0003984 MIMAT0012106 NNSW01000035_dd_Smes_g4_35 577784 577841 + S. mediterranea Nephrozoa No
Sme-Mir-71-o1b sme-mir-71a-2 MIR-71 GAAAGAC MIMAT0003984 MIMAT0013772 NNSW01000001_dd_Smes_g4_1 13481649 13481705 + S. mediterranea Nephrozoa No 1
Sme-Mir-71-o2 sme-mir-71b MIR-71 GAAAGAC MIMAT0003985 MIMAT0003986 NNSW01000131_dd_Smes_g4_131 1191188 1191254 + S. mediterranea Nephrozoa No 1
Sme-Mir-71-o3 sme-mir-71c MIR-71 GAAAGAC MIMAT0003987 MIMAT0012107 NNSW01000006_dd_Smes_g4_6 2195478 2195544 + S. mediterranea Nephrozoa No 1 1
Sme-Mir-71-o4 sme-mir-2167 MIR-71 GUGUUAA None MIMAT0011264 NNSW01000025_dd_Smes_g4_25 5887508 5887571 + S. mediterranea Nephrozoa No 1 1
Sme-Mir-76-P9a sme-mir-76 MIR-76 UCGUUGU MIMAT0011396 MIMAT0011397 NNSW01000064_dd_Smes_g4_64 2635469 2635533 + S. mediterranea Nephrozoa Unknown
Sme-Mir-76-P9b sme-mir-76 MIR-76 UCGUUGU MIMAT0011396 MIMAT0011397 NNSW01000064_dd_Smes_g4_64 2647535 2647599 + S. mediterranea Nephrozoa Unknown
Sme-Mir-87-o8 sme-mir-87a MIR-87 CACUUGG MIMAT0012109 MIMAT0003989 NNSW01000072_dd_Smes_g4_72 3052486 3052550 - S. mediterranea Protostomia No
Sme-Mir-87-o9 sme-mir-87b MIR-87 UGAGCAA MIMAT0012110 MIMAT0003990 NNSW01000183_dd_Smes_g4_183 1003279 1003349 + S. mediterranea Protostomia No 1
Sme-Mir-87-o10 sme-mir-87c MIR-87 UGAGCAA MIMAT0012133 MIMAT0011228 NNSW01000019_dd_Smes_g4_19 1464537 1464595 + S. mediterranea Protostomia No 1
Sme-Mir-87-o11 sme-mir-87d MIR-87 UGAGCAA MIMAT0012136 MIMAT0011235 NNSW01000320_dd_Smes_g4_320 69423 69485 - S. mediterranea Protostomia No 1
Sme-Mir-96-P1j sme-mir-96a MIR-96 UUGGCAC MIMAT0011262 MIMAT0012159 NNSW01000022_dd_Smes_g4_22 4678463 4678530 + S. mediterranea Bilateria No 1
Sme-Mir-96-P1k sme-mir-96b MIR-96 UUGGCAC MIMAT0011273 MIMAT0012163 NNSW01000112_dd_Smes_g4_112 1967642 1967703 - S. mediterranea Bilateria Unknown 1
Sme-Mir-124-P29 sme-mir-124d MIR-124 AAGGCAC MIMAT0012137 MIMAT0011238 NNSW01000004_dd_Smes_g4_4 3074856 3074909 - S. mediterranea Bilateria No 1
Sme-Mir-124-P30 sme-mir-124e MIR-124 AAGGCAC MIMAT0012138 MIMAT0011239 NNSW01000020_dd_Smes_g4_20 1711770 1711822 - S. mediterranea Bilateria No 1
Sme-Mir-124-P31a sme-mir-124a MIR-124 AAGGCAC MIMAT0012112 MIMAT0003992 NNSW01000335_dd_Smes_g4_335 158403 158461 - S. mediterranea Bilateria No
Sme-Mir-124-P31b sme-mir-124a MIR-124 AAGGCAC MIMAT0012112 MIMAT0003992 NNSW01000161_dd_Smes_g4_161 1391253 1391311 + S. mediterranea Bilateria No
Sme-Mir-124-P32 sme-mir-124b MIR-124 AAGGCAC MIMAT0012113 MIMAT0003993 NNSW01000043_dd_Smes_g4_43 867921 867975 - S. mediterranea Bilateria No
Sme-Mir-124-P33 sme-mir-124c-1 MIR-124 AAGGCAC MIMAT0003994 MIMAT0003995 NNSW01000029_dd_Smes_g4_29 2250629 2250682 - S. mediterranea Bilateria No 1
Sme-Mir-124-P34 sme-mir-124c-2 MIR-124 AAGGCAC MIMAT0013778 MIMAT0003995 NNSW01000102_dd_Smes_g4_102 910443 910504 - S. mediterranea Bilateria No 1
Sme-Mir-133-P16 sme-mir-133a MIR-133 UGGUCCC MIMAT0012155 MIMAT0011258 NNSW01000064_dd_Smes_g4_64 2266095 2266162 + S. mediterranea Bilateria No 1
Sme-Mir-133-P17 sme-mir-133b MIR-133 UGGUCCC MIMAT0012115 MIMAT0003999 NNSW01000154_dd_Smes_g4_154 718580 718633 + S. mediterranea Bilateria No 1
Sme-Mir-184-P28 sme-mir-184 MIR-184 ACGGAGG MIMAT0012116 MIMAT0004000 NNSW01000012_dd_Smes_g4_12 7152795 7152862 - S. mediterranea Nephrozoa No 1
Sme-Mir-184-P29 sme-mir-748 MIR-184 GGACGGA MIMAT0012123 MIMAT0004015 NNSW01000155_dd_Smes_g4_155 107015 107067 - S. mediterranea Nephrozoa No 1
Sme-Mir-190-P19 sme-mir-756 MIR-190 GAUAUGU MIMAT0004023 MIMAT0012127 NNSW01000125_dd_Smes_g4_125 1007325 1007389 + S. mediterranea Bilateria No 1
Sme-Mir-190-P20 sme-mir-190a MIR-190 GAUAUGU MIMAT0004001 MIMAT0004002 NNSW01000018_dd_Smes_g4_18 365786 365839 + S. mediterranea Bilateria No 1 1
Sme-Mir-190-P21 sme-mir-190b MIR-190 GAUAUGU MIMAT0004003 MIMAT0004004 NNSW01000083_dd_Smes_g4_83 666744 666807 - S. mediterranea Bilateria No 1 1 1
Sme-Mir-210-P17 sme-mir-2161 MIR-210 GUGCGUA MIMAT0012152 MIMAT0011255 NNSW01000069_dd_Smes_g4_69 431098 431163 - S. mediterranea Bilateria No 1
Sme-Mir-210-P18 sme-mir-2164 MIR-210 UGUGCGU MIMAT0012156 MIMAT0011259 NNSW01000022_dd_Smes_g4_22 2834662 2834717 - S. mediterranea Bilateria No 1
Sme-Mir-216-P2e sme-mir-216 MIR-216 AAUCUCA MIMAT0011245 MIMAT0012143 NNSW01000085_dd_Smes_g4_85 414251 414315 + S. mediterranea Nephrozoa No 1
Sme-Mir-216-P2f sme-mir-747 MIR-216 AAUCUCA MIMAT0004005 MIMAT0012117 NNSW01000007_dd_Smes_g4_7 5198956 5199024 + S. mediterranea Nephrozoa No
Sme-Mir-219-P10a sme-mir-219 MIR-219 GAUUGUC MIMAT0004006 MIMAT0012118 NNSW01000123_dd_Smes_g4_123 40416 40488 + S. mediterranea Bilateria No 1
Sme-Mir-219-P10b sme-mir-219 MIR-219 GAUUGUC MIMAT0004006 MIMAT0012118 NNSW01000387_dd_Smes_g4_387 101916 101988 + S. mediterranea Bilateria No 1
Sme-Mir-277-P7a sme-mir-277b MIR-277 AAAUGCA MIMAT0004008 MIMAT0004009 NNSW01000140_dd_Smes_g4_140 655258 655315 - S. mediterranea Protostomia No 1
Sme-Mir-277-P7b sme-mir-277d MIR-277 AAAUGCA MIMAT0012128 MIMAT0004024 NNSW01000268_dd_Smes_g4_268 448831 448887 - S. mediterranea Protostomia No
Sme-Mir-277-P8a sme-mir-277a MIR-277 AAAUGCA MIMAT0012119 MIMAT0004007 NNSW01000140_dd_Smes_g4_140 654964 655022 - S. mediterranea Protostomia No
Sme-Mir-277-P8b sme-mir-277c MIR-277 AAAUGCA MIMAT0012120 MIMAT0004010 NNSW01000268_dd_Smes_g4_268 448715 448777 - S. mediterranea Protostomia No 1
Sme-Mir-279-P19 sme-mir-61a MIR-279 GACUAGA MIMAT0012105 MIMAT0003983 NNSW01000252_dd_Smes_g4_252 319043 319099 - S. mediterranea Protostomia No 1
Sme-Mir-279-P20 sme-mir-61b MIR-279 GACUAGA MIMAT0012132 MIMAT0011227 NNSW01000037_dd_Smes_g4_37 4595299 4595354 - S. mediterranea Protostomia No 1
Sme-Mir-1175-P8 sme-mir-1175 MIR-1175 GAGAUUC MIMAT0012147 MIMAT0011249 NNSW01000008_dd_Smes_g4_8 4209507 4209570 + S. mediterranea Protostomia No 1
Sme-Mir-1175-P9 sme-mir-755 MIR-1175 GUGGAGC MIMAT0004022 MIMAT0012126 NNSW01000064_dd_Smes_g4_64 240466 240524 - S. mediterranea Protostomia Yes 1 1
Sme-Mir-1992-P5 sme-mir-1992 MIR-1992 CAGCAGU MIMAT0012142 MIMAT0011243 NNSW01000030_dd_Smes_g4_30 1784506 1784563 + S. mediterranea Platytrochozoa No 1
Sme-Mir-1992-P6-v1 sme-mir-2149 MIR-1992 GCCAAUG MIMAT0011229 MIMAT0012134 NNSW01000053_dd_Smes_g4_53 1164867 1164928 - S. mediterranea Platytrochozoa No 1
Sme-Mir-1992-P6-v2 sme-mir-2149 MIR-1992 CGCCAAU MIMAT0011229 MIMAT0012134 NNSW01000053_dd_Smes_g4_53 1164866 1164929 - S. mediterranea Platytrochozoa No
Sme-Mir-1993-P6 sme-mir-1993 MIR-1993 AUUAUGC MIMAT0012140 MIMAT0011241 NNSW01000027_dd_Smes_g4_27 2971604 2971665 + S. mediterranea Protostomia No 1
Sme-Mir-1993-P7 sme-mir-2162 MIR-1993 AUUAUGC MIMAT0011256 MIMAT0012153 NNSW01000017_dd_Smes_g4_17 2221561 2221616 + S. mediterranea Protostomia No 1
Sme-Mir-2148 sme-mir-2148 MIR-2148 GAAAUUC MIMAT0011224 MIMAT0012131 NNSW01000043_dd_Smes_g4_43 3192881 3192936 - S. mediterranea S. mediterranea No 1
Sme-Mir-2156 sme-mir-2156b MIR-2156 CUUACGG MIMAT0011393 MIMAT0011394 NNSW01000056_dd_Smes_g4_56 2430589 2430645 - S. mediterranea S. mediterranea No 1
Sme-Mir-2159 sme-mir-2159 MIR-2159 GCCUUUU MIMAT0011252 MIMAT0012150 NNSW01000024_dd_Smes_g4_24 706635 706691 - S. mediterranea S. mediterranea No
Sme-Mir-2160-P1a sme-mir-2160-1 MIR-2160 GGCGCUU MIMAT0011254 MIMAT0011416 NNSW01000046_dd_Smes_g4_46 574874 574938 + S. mediterranea Platyhelminthes Unknown 1
Sme-Mir-2160-P1b sme-mir-2160-2 MIR-2160 GGCGCUU MIMAT0011254 MIMAT0013776 NNSW01000046_dd_Smes_g4_46 574874 574938 + S. mediterranea Platyhelminthes Unknown 1
Sme-Mir-2165 sme-mir-2165 MIR-2165 AAUUCGA MIMAT0012157 MIMAT0011260 NNSW01000069_dd_Smes_g4_69 1193079 1193150 - S. mediterranea S. mediterranea No 1
Sme-Mir-2166 sme-mir-2166 MIR-2166 AGAAUAA None MIMAT0011263 NNSW01000079_dd_Smes_g4_79 1079371 1079435 - S. mediterranea S. mediterranea No
Sme-Mir-2169 sme-mir-2169 MIR-2169 ACUUUGA MIMAT0011267 MIMAT0012161 NNSW01000073_dd_Smes_g4_73 1419130 1419183 + S. mediterranea S. mediterranea No 1
Sme-Mir-2170 sme-mir-2170 MIR-2170 CAGUGAA None MIMAT0011269 NNSW01000070_dd_Smes_g4_70 1655528 1655584 - S. mediterranea S. mediterranea No
Sme-Mir-2179 sme-mir-2179 MIR-2179 GACUAUA MIMAT0012166 MIMAT0011281 NNSW01000239_dd_Smes_g4_239 274382 274440 + S. mediterranea S. mediterranea No 1

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