Mir-124-P31b

MirGeneDB ID

Sme-Mir-124-P31b

Family name

MIR-124 (all species)

Seed

AAGGCAC

Species

Freshwater planarian (Schmidtea mediterranea)

MiRBase ID

sme-mir-124a

Paralogues

Sme-Mir-124-P31a Sme-Mir-124-P32 Sme-Mir-124-P33 Sme-Mir-124-P34 Sme-Mir-124-P35 Sme-Mir-124-P36

Orthologues

Aae-Mir-124 Asu-Mir-124 Bfl-Mir-124 Bge-Mir-124 Bla-Mir-124 Cel-Mir-124 Cte-Mir-124 Dan-Mir-124 Dma-Mir-124 Dme-Mir-124 Dmo-Mir-124 Dpu-Mir-124 Dsi-Mir-124 Dya-Mir-124 Esc-Mir-124 Hme-Mir-124 Isc-Mir-124 Lan-Mir-124 Npo-Mir-124 Obi-Mir-124 Ovu-Mir-124 Pfl-Mir-124 Pmi-Mir-124 Sko-Mir-124 Spu-Mir-124 Tca-Mir-124 Xbo-Mir-124

Node of Origin (locus)

S. mediterranea

Node of Origin (family)

Bilateria

Genome context
(Sme_GCA_002600895.1_ASM260089v1_alt)

NNSW01000335_dd_Smes_g4_335: 158403-158461 [-] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

UGGAAAGUAAUAAAAAGUUCAAUCAGAUGUGCUUUUAACGCGGAGCUUUAGUAAUUUAACAUGUAUACUAAGGCACGCGGUGAAUGCUUACUUGAUUGAGUAAUAAUCAUUUUUUACAU

Get precursor sequence

Structure

        10          20        30        40        50         
UGGAAAGUAAUAAAAAG--|        A  U  U    A    GA        AAUUUA 
                   UUCAAUCAG UG GC UUUA CGCG  GCUUUAGU      A
                   GAGUUAGUU AU CG AAGU GCGC  CGGAAUCA      C
UACAUUUUUUACUAAUAAU^        C  U  U    G    A-        UAUGUA 
       110       100        90        80         70        60