MirGeneDB 2.1
MirGeneDB ID

Sme-Mir-210-P18

Family name MIR-210 (all species)
Seed UGUGCGU
Species Freshwater planarian (Schmidtea mediterranea)
MiRBase ID sme-mir-2164
Paralogues Sme-Mir-210-P17 
Orthologues Aca-Mir-210  Ami-Mir-210  Bfl-Mir-210  Bla-Mir-210  Bta-Mir-210  Cfa-Mir-210  Cgi-Mir-210  Cli-Mir-210  Cmi-Mir-210  Cpi-Mir-210  Cpo-Mir-210  Dma-Mir-210  Dno-Mir-210  Dpu-Mir-210  Dre-Mir-210  Ebu-Mir-210  Efe-Mir-210  Ete-Mir-210  Gga-Mir-210  Gja-Mir-210  Gmo-Mir-210  Hsa-Mir-210  Isc-Mir-210  Lan-Mir-210  Lch-Mir-210  Lgi-Mir-210  Loc-Mir-210  Mal-Mir-210  Mdo-Mir-210  Mml-Mir-210  Mmu-Mir-210  Mun-Mir-210  Npo-Mir-210  Oan-Mir-210  Ocu-Mir-210  Pbv-Mir-210  Pma-Mir-210  Rno-Mir-210  Sha-Mir-210  Sko-Mir-210  Spt-Mir-210  Tgu-Mir-210  Tni-Mir-210  Xbo-Mir-210-P18  Xtr-Mir-210 
Node of Origin (locus) S. mediterranea
Node of Origin (family) Bilateria
Genome context
(Sme_GCA_002600895.1_ASM260089v1_alt)		 NNSW01000022_dd_Smes_g4_22: 2834662-2834717 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AUUUUAUUAACCAUAUUCAGGUAAUAAAAUUAUAUUUGAUUCACGUAGAGAUUGAGAUCUAUCUUGUGCGUGAUAUCAAGUAUAAUAAUGUUCUGACUCUUCAUCUAAUAUAUAAA
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Structure
        10            20        30        40          50      
AUUUUAUUAACCAUAUU----|   UA   AA            -       -    UUGA 
                     CAGG  AUA  AUUAUAUUUGAU UCACGUA GAGA    G
                     GUCU  UGU  UAAUAUGAACUA AGUGCGU UUCU    A
AAAUAUAUAAUCUACUUCUCA^   --   AA            U       G    AUCU 
    110       100          90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Se Se Se Se Se Se Se Se Se Se Se Se Ne Wh Wh Wh
Star sequence

Sme-Mir-210-P18_5p*
mirBase accessionMIMAT0012156
Sequence 
0- UAUAUUUGAUUCACGUAGAGA -21
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Mature sequence

Sme-Mir-210-P18_3p
mirBase accessionMIMAT0011259
Sequence 
33- UUGUGCGUGAUAUCAAGUAUAAU -56
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