MirGeneDB 3.0
47 Schistosoma mansoni microRNA genes
Sort by genome coordinates Motifs Tissue expression
-   +
MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC Ad Ad Ad Ad Ad Ad Ad Ad Ad Ad Ad Ad Ad Ad Ad Ce Ce Ce Eg Eg Eg Eg Eg Eg Mi Mi Sc Sc Sc Sm Sm Sp Sp Sp
Sma-Bantam sma-bantam BANTAM GAGAUCG MIMAT0032104 MIMAT0010182 HE601629.3 13296245 13296303 - Protostomia Protostomia No
Sma-Let-7 sma-let-7 LET-7 GAGGUAG MIMAT0010180 MIMAT0032102 HE601630.3 9125299 9125367 - Bilateria Bilateria No 1
Sma-Mir-1 sma-mir-1b MIR-1 GGAAUGU MIMAT0033641 MIMAT0033642 OU426850.1 17242666 17242777 + Bilateria Bilateria No 1
Sma-Mir-2-o130 sma-mir-2a MIR-2 CACAGCC MIMAT0025029 MIMAT0025030 OU426849.1 4544063 4544117 + S. mansoni Protostomia No 1
Sma-Mir-2-o131 sma-mir-2b MIR-2 AUCACAG MIMAT0025031 MIMAT0025032 OU426849.1 4544155 4544212 + S. mansoni Protostomia No 1
Sma-Mir-2-o132 sma-mir-2e MIR-2 AUCACAG MIMAT0025036 MIMAT0025037 OU426849.1 4544251 4544316 + S. mansoni Protostomia Unknown 1 1
Sma-Mir-2-o133 sma-mir-2f MIR-2 GUGUUGA None MIMAT0033691 HE601628.3 9679871 9679943 + S. mansoni Protostomia Unknown 1
Sma-Mir-2-o134 sma-mir-2d MIR-2 UCAUCCU MIMAT0032135 MIMAT0025035 HE601628.3 9679986 9680055 + S. mansoni Protostomia Unknown 1
Sma-Mir-2-o135 sma-mir-2d MIR-2 AUCACAG MIMAT0032135 MIMAT0025035 HE601628.3 9680098 9680158 + S. mansoni Protostomia Unknown 1
Sma-Mir-7-P16 None MIR-7 GGAAGAC None None HE601626.3 20082163 20082270 + Neodermata Bilateria No 1
Sma-Mir-7-P17 sma-mir-7 MIR-7 GGAAGAC MIMAT0033598 MIMAT0033599 HE601627.3 25183038 25183119 + Neodermata Bilateria No 1
Sma-Mir-8 sma-mir-8 MIR-8 AAUACUG MIMAT0025045 MIMAT0025046 HE601624.3 14354984 14355039 - Nephrozoa Nephrozoa No 1
Sma-Mir-9 None MIR-9 CUUUGGU None None HE601627.3 25734003 25734099 + Bilateria Bilateria Unknown 1
Sma-Mir-10-P1 sma-mir-10 MIR-10 ACCCUGU MIMAT0025023 MIMAT0025024 HE601627.3 33574386 33574443 + Bilateria Eumetazoa Unknown 1
Sma-Mir-10-P3o3 sma-mir-125c MIR-10 CCCUGAG MIMAT0033510 MIMAT0033511 HE601624.3 52771706 52771788 + S. mansoni Eumetazoa Unknown
Sma-Mir-10-P3o4 sma-mir-125a MIR-10 CCCUGAG MIMAT0010183 MIMAT0032105 HE601630.3 15003808 15003886 - S. mansoni Eumetazoa No 1
Sma-Mir-10-P3o5 sma-mir-125b MIR-10 CCCUGAG MIMAT0010184 None HE601624.3 86578326 86578400 - S. mansoni Eumetazoa No
Sma-Mir-22-P1 sma-mir-745 MIR-22 GCUGCCU MIMAT0033588 MIMAT0033589 HE601627.3 29064404 29064480 - Bilateria Bilateria No 1
Sma-Mir-31 sma-mir-31 MIR-31 GGCAAGA MIMAT0025038 MIMAT0032136 HE601629.3 3356536 3356599 - Bilateria Bilateria Unknown 1
Sma-Mir-36-o33 sma-mir-8457 MIR-36 GGGUGGA MIMAT0033626 MIMAT0033627 HE601630.3 16879209 16879307 - S. mansoni Protostomia No
Sma-Mir-36-o34 sma-mir-36a MIR-36 CACCGGG MIMAT0032137 MIMAT0025041 HE601624.3 72169272 72169343 - S. mansoni Protostomia No
Sma-Mir-36-o35 sma-mir-36b MIR-36 CACCGGG MIMAT0033514 MIMAT0033515 HE601624.3 72204878 72204977 - S. mansoni Protostomia No 1
Sma-Mir-67 None MIR-67 CACAACC None None HE601627.3 1541977 1542084 + Protostomia Protostomia No 1
Sma-Mir-71-o5 sma-mir-71a MIR-71 GAAAGAC MIMAT0010181 MIMAT0032103 OU426849.1 4543971 4544024 + Bilateria Nephrozoa No 1 1
Sma-Mir-71-o6 sma-mir-71b MIR-71 GAAAGAC MIMAT0025043 MIMAT0025044 HE601628.3 9679749 9679802 + Bilateria Nephrozoa No 1
Sma-Mir-76 None MIR-76 CAGUUUC None None HE601624.3 37186577 37186651 + Nephrozoa Nephrozoa Unknown 1
Sma-Mir-87-o32 None MIR-87 UGAGCAA None None HE601626.3 12868984 12869221 - Protostomia Protostomia No 1
Sma-Mir-92-o132 None MIR-92 AUUGCAC None None HE601624.3 60358613 60358707 + S. mansoni Bilateria No 1 1
Sma-Mir-92-o133 sma-mir-3479 MIR-92 AUUGCAC MIMAT0025039 MIMAT0025039 HE601627.3 8894058 8894113 - S. mansoni Bilateria No 1 1
Sma-Mir-96-P1 sma-mir-96 MIR-96 UUGGCAC MIMAT0033635 MIMAT0033636 OU426848.1 15420153 15420208 - Bilateria Bilateria Unknown 1
Sma-Mir-124 sma-mir-124a MIR-124 AAGGCAC MIMAT0025025 MIMAT0025026 HE601629.3 22965225 22965299 - Bilateria Bilateria No 1
Sma-Mir-133 None MIR-133 UGGUCCC None None OU426850.1 17266094 17266327 + Bilateria Bilateria No 1
Sma-Mir-190 sma-mir-190 MIR-190 GAUAUGU MIMAT0025027 MIMAT0025028 HE601624.3 52387524 52387604 - Bilateria Bilateria No 1
Sma-Mir-210 None MIR-210 UGUGCGU None None HE601627.3 37450800 37450939 + Bilateria Bilateria No
Sma-Mir-216-P1 None MIR-216 AAUAUCA None None HE601626.3 9299589 9299642 - Nephrozoa Nephrozoa Unknown 1
Sma-Mir-219 sma-mir-219 MIR-219 GAUUGUC MIMAT0033504 MIMAT0033505 HE601624.3 9217024 9217120 - Bilateria Bilateria Unknown 1
Sma-Mir-277-P7 None MIR-277 AAAUGCA None None HE601627.3 36604211 36604356 + Tricladida + Neodermata Protostomia No 1 1
Sma-Mir-277-P8 None MIR-277 AAAUGCA None None HE601627.3 36604484 36604621 + Tricladida + Neodermata Protostomia No 1 1
Sma-Mir-279 sma-mir-61 MIR-279 GACUAGA MIMAT0032138 MIMAT0025042 HE601624.3 84593791 84593886 + Protostomia Protostomia No 1
Sma-Mir-281 sma-mir-281 MIR-281 GUCAUGG MIMAT0033592 MIMAT0033593 HE601625.3 8365807 8365888 + Nephrozoa Nephrozoa No 1
Sma-Mir-750 None MIR-750 CAGAUCU None None OU426848.1 7214832 7215033 - Protostomia Protostomia Unknown 1
Sma-Mir-1175 sma-mir-755 MIR-1175 GAGAUUC MIMAT0033631 MIMAT0033632 OU426848.1 7214600 7214709 - Protostomia Protostomia No 1 1
Sma-Mir-1989 None MIR-1989 CAGCUGU None None HE601626.3 19053664 19053745 + Platytrochozoa Platytrochozoa No 1
Sma-Mir-1992 None MIR-1992 CAGCAGU None None HE601630.3 11729903 11730000 - Platytrochozoa Platytrochozoa Yes 1
Sma-Mir-1993 sma-mir-2162 MIR-1993 AUUAUGC MIMAT0033665 MIMAT0033666 OU426850.1 27549549 27549604 - Protostomia Protostomia No 1
Sma-Mir-2160 sma-mir-8437 MIR-2160 AACAUUU MIMAT0033578 MIMAT0033579 HE601626.3 42306730 42306795 + Platyhelminthes Platyhelminthes No
Sma-Novel-1 None SMA-NOVEL-1 UCACAGA None None HE601624.3 28064339 28064437 + S. mansoni S. mansoni No 1

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all

Download genome coordinates (GFF format)

Download count matrix