MirGeneDB 3.0
MirGeneDB ID

Sma-Mir-750

Family name MIR-750 (all species)
Seed CAGAUCU
Species Blood fluke (Schistosoma mansoni)
MiRBase ID
Paralogues
Orthologues Aae-Mir-750  Aga-Mir-750  Agr-Mir-750  Asu-Mir-750  Ava-Mir-750-P9  Ava-Mir-750-P10  Bge-Mir-750  Bko-Mir-750  Bpl-Mir-750  Csc-Mir-750-P7  Csc-Mir-750-P8  Cte-Mir-750  Dgr-Mir-750  Dlo-Mir-750  Dma-Mir-750  Dpu-Mir-750  Eba-Mir-750  Efe-Mir-750-P1  Efe-Mir-750-P2  Efe-Mir-750-P3  Esc-Mir-750  Hme-Mir-750  Hru-Mir-750  Isc-Mir-750  Lan-Mir-750  Lgi-Mir-750  Llo-Mir-750  Lpo-Mir-750-P4  Lpo-Mir-750-P5  Lpo-Mir-750-P6  Mgi-Mir-750  Mom-Mir-750  Npo-Mir-750  Obi-Mir-750  Ofu-Mir-750  Ovu-Mir-750  Pau-Mir-750  Pca-Mir-750  Pcr-Mir-750  Pdu-Mir-750  Pve-Mir-750  Rph-Mir-750  Sme-Mir-750  Snu-Mir-750  Tca-Mir-750  Tur-Mir-750  War-Mir-750 
Node of Origin (locus) Protostomia
Node of Origin (family) Protostomia
Genome context
(GCA_000237925.5_SM_V9_genomic)		 OU426848.1: 7214832-7215033 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UAUAUAAAUAUACAUAAACCAGGUAUGUAAAAGUUGGAAGGCCAGAUUUAGCGAAUAUUCACAACUGUAAUCUUCAAAUAACUUGUUCUCAACGAUAAAAUUGUCAUCAAUUAAUAGAAGUACAUGUACACUAAAUGAAAUUAUGACUGAGAAUUCAGUUAACAUUCAUAGAACAAGUUAGUUACUAGUGAGUAGAAGGAUUCUACCGCCAGAUCUGUCGCUUCCAACUCUACAAAUUCUGGCUUAACAGCUUUAACUAUGU
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Structure
        10          20         30        40         50        60        70        80        90       100       110       120          
UAUAUAAAUAUACAUAAA--     UA-|   AA         GC-       A   AAUAUUCACAACUGUAAUCUUCAAAUAACUUGUUCUCAACGAUAAAAUUGUCAUCAAUUAAUAGAAGUACAUGUAC 
                    CCAGG   UGUA  AGUUGGAAG   CAGAUUU GCG                                                                            \
                    GGUCU   ACAU  UCAACCUUC   GUCUAGA CGC                                                                            A
UGUAUCAAUUUCGACAAUUC     UAA^   C-         GCU       C   CAUCUUAGGAAGAUGAGUGAUCAUUGAUUGAACAAGAUACUUACAAUUGACUUAAGAGUCAGUAUUAAAGUAAAUC 
260       250       240       230        220       210       200       190       180       170       160       150       140
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr
Star sequence

Sma-Mir-750_5p*
mirBase accessionNone
Sequence 
0- AAGUUGGAAGGCCAGAUUUAGCG -23
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Mature sequence

Sma-Mir-750_3p
mirBase accessionNone
Sequence 
178- CCAGAUCUGUCGCUUCCAACUCUA -202
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