MirGeneDB 3.0

MirGeneDB ID

Tca-Mir-750

Family name MIR-750 (all species)
Seed CAGAUCU
Species Red flour beetle (Tribolium castaneum)
MiRBase ID tca-mir-750
Paralogues
Orthologues Aae-Mir-750  Aga-Mir-750  Agr-Mir-750  Asu-Mir-750  Ava-Mir-750-P9  Ava-Mir-750-P10  Bge-Mir-750  Bko-Mir-750  Bpl-Mir-750  Csc-Mir-750-P7  Csc-Mir-750-P8  Cte-Mir-750  Dgr-Mir-750  Dlo-Mir-750  Dma-Mir-750  Dpu-Mir-750  Eba-Mir-750  Efe-Mir-750-P1  Efe-Mir-750-P2  Efe-Mir-750-P3  Esc-Mir-750  Hme-Mir-750  Hru-Mir-750  Isc-Mir-750  Lan-Mir-750  Lgi-Mir-750  Llo-Mir-750  Lpo-Mir-750-P4  Lpo-Mir-750-P5  Lpo-Mir-750-P6  Mgi-Mir-750  Mom-Mir-750  Npo-Mir-750  Obi-Mir-750  Ofu-Mir-750  Ovu-Mir-750  Pau-Mir-750  Pca-Mir-750  Pcr-Mir-750  Pdu-Mir-750  Pve-Mir-750  Rph-Mir-750  Sma-Mir-750  Sme-Mir-750  Snu-Mir-750  Tur-Mir-750  War-Mir-750 
Node of Origin (locus) Protostomia
Node of Origin (family) Protostomia
Genome context
(Tcas5.2)
LG4: 9452255-9452313 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-750)
Mir-750 LG4: 9452255-9452313 [+] Ensembl
Mir-1175 LG4: 9452407-9452465 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
CUGUGAGAGGACAGAAAGCAAAGGGCCCUUGGGUGGAAGGUUGGAUCUUCGCAUGAUUCAAGUUGCCAGAUCUAACUCUUCCAUAUGACGGUCAUUUGCCAACACGCCCGAAUUUCGGC
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Structure
        10           20        30         40        50        
CUGUGAGAGGACAGAAA---     G    C   G       -|        UC   UGAU 
                    GCAAA GGCC UUG GUGGAAG GUUGGAUCU  GCA    U
                    CGUUU CUGG AGU UACCUUC CAAUCUAGA  CGU    C
CGGCUUUAAGCCCGCACAAC     A    C   A       U^        C-   UGAA 
       110       100        90        80        70         60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Ad Ea Em Em Em Em Em Fe Fe Fe Fe Oo
Star sequence

Tca-Mir-750_5p*

mirBase accessionMIMAT0018820
Sequence
0- GGGUGGAAGGUUGGAUCUUCGCA -23
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Mature sequence

Tca-Mir-750_3p

mirBase accessionMIMAT0018821
Sequence
35- CCAGAUCUAACUCUUCCAUAUGAC -59
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