MirGeneDB ID | Ava-Mir-750-P9 |
Family name |
MIR-750 (all species) |
Seed |
GCUGGAA |
Species |
Bdelloid rotifer (Adineta vaga) |
MiRBase ID |
|
Paralogues |
Ava-Mir-750-P10
|
Orthologues |
Aae-Mir-750
Aga-Mir-750
Agr-Mir-750
Asu-Mir-750
Bge-Mir-750
Bko-Mir-750
Bpl-Mir-750
Cte-Mir-750
Dgr-Mir-750
Dlo-Mir-750
Dma-Mir-750
Dpu-Mir-750
Eba-Mir-750
Esc-Mir-750
Hme-Mir-750
Hru-Mir-750
Isc-Mir-750
Lan-Mir-750
Lgi-Mir-750
Llo-Mir-750
Mgi-Mir-750
Mom-Mir-750
Npo-Mir-750
Obi-Mir-750
Ofu-Mir-750
Ovu-Mir-750
Pau-Mir-750
Pca-Mir-750
Pcr-Mir-750
Pdu-Mir-750
Pve-Mir-750
Rph-Mir-750
Sma-Mir-750
Sme-Mir-750
Snu-Mir-750
Tca-Mir-750
Tur-Mir-750
War-Mir-750
|
Node of Origin (locus) |
A. vaga
|
Node of Origin (family) |
Protostomia
|
Genome context (GCA_021613535.1_ASM2161353v1_AVA) |
CP075495.1: 8298204-8298264 [-]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
ACGAUUCUUGUUUUCACUUAGUUGUAUAUCAGCUGGAAGAUGGAUUUCGCAUAGAUGUCUUCUGAUGCCAGAUCUAUAUUCUUCCAGCUCAUAUCAAUAAGUUUCUAGUCAUCAUCAAUAU
Get precursor sequence
|
Structure | 10 20 30 40 50
ACGAUUCUUGUUUUCACUUA--- U C ---| C UAGAUG
GUUG AUAU AGCUGGAAGA UGGAUUU GCA U
UAAC UAUA UCGACCUUCU AUCUAGA CGU C
UAUAACUACUACUGAUCUUUGAA - C UAU^ C AGUCUU
. 110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Mature sequence |
Ava-Mir-750-P9_5p |
mirBase accession | None |
Sequence |
0- AGCUGGAAGAUGGAUUUCGCA -21
Get sequence
|
Co-mature sequence |
Ava-Mir-750-P9_3p |
mirBase accession | None |
Sequence |
37- CCAGAUCUAUAUUCUUCCAGCUCA -61
Get sequence
|