MirGeneDB 2.1

MirGeneDB ID

Cte-Mir-750

Family name MIR-750 (all species)
Seed CAGAUCU
Species Polychaete worm (Capitella teleta)
MiRBase ID cte-mir-750
Paralogues
Orthologues Aae-Mir-750  Asu-Mir-750  Bge-Mir-750  Bpl-Mir-750  Cgi-Mir-750  Csc-Mir-750-P8  Csc-Mir-750-P9  Dma-Mir-750  Dpu-Mir-750  Efe-Mir-750-P1  Efe-Mir-750-P2  Efe-Mir-750-P3  Esc-Mir-750  Hme-Mir-750  Isc-Mir-750  Lan-Mir-750  Lgi-Mir-750  Lpo-Mir-750-P5  Lpo-Mir-750-P6  Lpo-Mir-750-P7  Npo-Mir-750  Obi-Mir-750  Ovu-Mir-750  Sme-Mir-750  Tca-Mir-750 
Node of Origin (locus) Protostomia
Node of Origin (family) Protostomia
Genome context
(Capitella_teleta_v1.0)
CAPTEscaffold_910: 14366-14434 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-750)
Mir-750 CAPTEscaffold_910: 14366-14434 [+] Ensembl
Mir-1175 CAPTEscaffold_910: 15451-15510 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
GGAGUACUUGAUGUUCUGCCAGGUGCGAUGAGUUGGAGGAUUGGGUCUCAGCAUUGGACGAGCGGUUUGUGGAGUGCCAGAUCUAACUCUUCCAGCUCAUCCCACUCUGGACCUCCUCUUCUUUGACGG
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Structure
        10         20         30        40         50        60    
GGAGUACUUGAUGUUCUG-    -   C              -|       CA   UUGGACGAGC 
                   CCAG GUG GAUGAGUUGGAGGA UUGGGUCU  GCA          \
                   GGUC CAC CUACUCGACCUUCU AAUCUAGA  CGU          G
GGCAGUUUCUUCUCCUCCA    U   C              C^       C-   GAGGUGUUUG 
       120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
To
Star sequence

Cte-Mir-750_5p*

mirBase accessionNone
Sequence
0- AGUUGGAGGAUUGGGUCUCAGCA -23
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Mature sequence

Cte-Mir-750_3p

mirBase accessionMIMAT0009547
Sequence
46- CCAGAUCUAACUCUUCCAGCUCA -69
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