MirGeneDB ID | Esc-Mir-750 |
---|---|
Family name | MIR-750 (all species) |
Seed | CAGAUCU |
Species | Hawaiian bobtail squid (Euprymna scolopes) |
MiRBase ID | |
Paralogues | |
Orthologues | Aae-Mir-750 Aga-Mir-750 Agr-Mir-750 Asu-Mir-750 Ava-Mir-750-P9 Ava-Mir-750-P10 Bge-Mir-750 Bko-Mir-750 Bpl-Mir-750 Csc-Mir-750-P7 Csc-Mir-750-P8 Cte-Mir-750 Dgr-Mir-750 Dlo-Mir-750 Dma-Mir-750 Dpu-Mir-750 Eba-Mir-750 Efe-Mir-750-P1 Efe-Mir-750-P2 Efe-Mir-750-P3 Hme-Mir-750 Hru-Mir-750 Isc-Mir-750 Lan-Mir-750 Lgi-Mir-750 Llo-Mir-750 Lpo-Mir-750-P4 Lpo-Mir-750-P5 Lpo-Mir-750-P6 Mgi-Mir-750 Mom-Mir-750 Npo-Mir-750 Obi-Mir-750 Ofu-Mir-750 Ovu-Mir-750 Pau-Mir-750 Pca-Mir-750 Pcr-Mir-750 Pdu-Mir-750 Pve-Mir-750 Rph-Mir-750 Sma-Mir-750 Sme-Mir-750 Snu-Mir-750 Tca-Mir-750 Tur-Mir-750 War-Mir-750 |
Node of Origin (locus) | Protostomia |
Node of Origin (family) | Protostomia |
Genome context (GCA_004765925.1_miRNA_LOCI) |
Esc-Mir-750_pre_SRIE01054669.1:48155-48274: 20-101 [-] Ensembl |
Precursor (pre-Mir +30nt flank) | AGUUGGAAGGUUAGGUUUUUGCAUAUAUACAUACAUAUAUAUAUAUCUCUGAACAAAUGCCAGAUCUAACUCUUCCAGCUCAGet precursor sequence |
Structure | 10 20 30 -- - UU ----------| C C AGUUGGAAG GUUAGGUUU GCAU AUAUA AUA A UCGACCUUC CAAUCUAGA CGUA UAUAU UAU U AC U C- AACAAGUCUC^ A A 80 70 60 50 40 |
Deep sequencing | |
3' NTU | No |
Motifs | No |
Star sequence | Esc-Mir-750_5p* |
mirBase accession | None |
Sequence |
0- AGUUGGAAGGUUAGGUUUUUGCA -23
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|
Mature sequence | Esc-Mir-750_3p |
mirBase accession | None |
Sequence |
59- CCAGAUCUAACUCUUCCAGCUCA -82
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|