MirGeneDB 3.0

MirGeneDB ID

Snu-Mir-750

Family name MIR-750 (all species)
Seed CAGAUCU
Species Peanut worm (Sipunculus nudus)
MiRBase ID
Paralogues
Orthologues Aae-Mir-750  Aga-Mir-750  Agr-Mir-750  Asu-Mir-750  Ava-Mir-750-P9  Ava-Mir-750-P10  Bge-Mir-750  Bko-Mir-750  Bpl-Mir-750  Csc-Mir-750-P7  Csc-Mir-750-P8  Cte-Mir-750  Dgr-Mir-750  Dlo-Mir-750  Dma-Mir-750  Dpu-Mir-750  Eba-Mir-750  Efe-Mir-750-P1  Efe-Mir-750-P2  Efe-Mir-750-P3  Esc-Mir-750  Hme-Mir-750  Hru-Mir-750  Isc-Mir-750  Lan-Mir-750  Lgi-Mir-750  Llo-Mir-750  Lpo-Mir-750-P4  Lpo-Mir-750-P5  Lpo-Mir-750-P6  Mgi-Mir-750  Mom-Mir-750  Npo-Mir-750  Obi-Mir-750  Ofu-Mir-750  Ovu-Mir-750  Pau-Mir-750  Pca-Mir-750  Pcr-Mir-750  Pdu-Mir-750  Pve-Mir-750  Rph-Mir-750  Sma-Mir-750  Sme-Mir-750  Tca-Mir-750  Tur-Mir-750  War-Mir-750 
Node of Origin (locus) Protostomia
Node of Origin (family) Protostomia
Genome context
(GCA_026874595.1_ASM2687459v1_Sipunculus_nudus)
CM049309.1: 74684902-74684961 [+]
Precursor
(pre-Mir +30nt flank)
GCACGGUGGUUGAUAAUUUGUAUUACCGAGAGCUGAAAGUUUAGAUCUCAGGCAUCCUGUUCUACUGCCAGAUCUAACUCUUCCAGCUCACGUUGAUCCAAAAUUUAUGCAAAAUAGCCU
Get precursor sequence
Structure
        10          20        30        40         50          
GCACGGUGGUUGAUAAU--   U    C  A      A   U-|       CA    UCCUG 
                   UUG AUUA CG GAGCUG AAG  UUAGAUCU  GGCA     \
                   AAC UAGU GC CUCGAC UUC  AAUCUAGA  CCGU     U
UCCGAUAAAACGUAUUUAA   C    U  A      C   UC^       --    CAUCU 
.       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
 +
Ph
Star sequence

Snu-Mir-750_5p*

mirBase accessionNone
Sequence
0- AGCUGAAAGUUUAGAUCUCAGGCA -24
Get sequence
Mature sequence

Snu-Mir-750_3p

mirBase accessionNone
Sequence
37- CCAGAUCUAACUCUUCCAGCUCA -60
Get sequence