MirGeneDB 3.0
MirGeneDB ID

Efe-Mir-750-P1

Family name MIR-750 (all species)
Seed CAGAUCU
Species Common brandling worm (Eisenia fetida)
MiRBase ID
Paralogues Efe-Mir-750-P2  Efe-Mir-750-P3 
Orthologues Aae-Mir-750  Aga-Mir-750  Agr-Mir-750  Asu-Mir-750  Bge-Mir-750  Bko-Mir-750  Bpl-Mir-750  Cte-Mir-750  Dgr-Mir-750  Dlo-Mir-750  Dma-Mir-750  Dpu-Mir-750  Eba-Mir-750  Esc-Mir-750  Hme-Mir-750  Hru-Mir-750  Isc-Mir-750  Lan-Mir-750  Lgi-Mir-750  Llo-Mir-750  Mgi-Mir-750  Mom-Mir-750  Npo-Mir-750  Obi-Mir-750  Ofu-Mir-750  Ovu-Mir-750  Pau-Mir-750  Pca-Mir-750  Pcr-Mir-750  Pdu-Mir-750  Pve-Mir-750  Rph-Mir-750  Sma-Mir-750  Sme-Mir-750  Snu-Mir-750  Tca-Mir-750  Tur-Mir-750  War-Mir-750 
Node of Origin (locus) E. fetida
Node of Origin (family) Protostomia
Genome context
(Efe_combined)		 Efet.01.20002: 2998-3060 [+]
Precursor
(pre-Mir +30nt flank)
GCGUCGUUGUAGAUCGUGCUUGGCCGCGUGAGCUGGUGGAAUAGAUCUCGGCAUGAGCAUUGAUUAACUGCCAGAUCUAACUCUUCCGGCUGGUUCGGUUCGGCAUCAGCAUCAACAAGACCU
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Structure
        10          20        30        40         50        60 
GCGUCGUUGUAGAUCGU--   UG    CG G      U   A-|      C   AUGAGCAU 
                   GCU  GCCG  U AGCUGG GGA  UAGAUCU GGC        \
                   CGG  UGGC  G UCGGCC UCU  AUCUAGA CCG        U
UCCAGAACAACUACGACUA   CU    UU G      U   CA^      -   UCAAUUAG 
 120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Efe-Mir-750-P1_5p*
mirBase accessionNone
Sequence 
0- AGCUGGUGGAAUAGAUCUCGGC -22
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Mature sequence

Efe-Mir-750-P1_3p
mirBase accessionNone
Sequence 
40- CCAGAUCUAACUCUUCCGGCUGG -63
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