MirGeneDB ID | Ovu-Mir-750 |
Family name |
MIR-750 (all species) |
Seed |
CAGAUCU |
Species |
Common octopus (Octopus vulgaris) |
MiRBase ID |
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Paralogues |
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Orthologues |
Aae-Mir-750
Aga-Mir-750
Agr-Mir-750
Asu-Mir-750
Ava-Mir-750-P9
Ava-Mir-750-P10
Bge-Mir-750
Bko-Mir-750
Bpl-Mir-750
Csc-Mir-750-P7
Csc-Mir-750-P8
Cte-Mir-750
Dgr-Mir-750
Dlo-Mir-750
Dma-Mir-750
Dpu-Mir-750
Eba-Mir-750
Efe-Mir-750-P1
Efe-Mir-750-P2
Efe-Mir-750-P3
Esc-Mir-750
Hme-Mir-750
Hru-Mir-750
Isc-Mir-750
Lan-Mir-750
Lgi-Mir-750
Llo-Mir-750
Lpo-Mir-750-P4
Lpo-Mir-750-P5
Lpo-Mir-750-P6
Mgi-Mir-750
Mom-Mir-750
Npo-Mir-750
Obi-Mir-750
Ofu-Mir-750
Pau-Mir-750
Pca-Mir-750
Pcr-Mir-750
Pdu-Mir-750
Pve-Mir-750
Rph-Mir-750
Sma-Mir-750
Sme-Mir-750
Snu-Mir-750
Tca-Mir-750
Tur-Mir-750
War-Mir-750
|
Node of Origin (locus) |
Protostomia
|
Node of Origin (family) |
Protostomia
|
Genome context (GCA_003957725.1_ASM395772v1_OVU) |
RXHP01074399.1: 2300-2362 [-]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
GAUGUUGCUAUUGAUAAAGCCAUGCCUGUGCGUUGGAAGGUUAGGUUUUCGCACAUAGUUUAGCCUGUUGCCAGAUCUAACUCUUCCAGCUCAUAGUUGUGGGGUACAGCAGCAGCAGCAGCC
Get precursor sequence
|
Structure | 10 20 30 40 50 60
GAUGUUGCUAUUGAUAAAG-- GC C -| UC CAUAGUU
CCAU CUGUG GUUGGAAG GUUAGGUUU GCA \
GGUG GAUAC CGACCUUC CAAUCUAGA CGU U
CCGACGACGACGACGACAUGG UU U U^ C- UGUCCGA
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
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Ax |
Ce |
Fr |
He |
In |
Op |
Op |
Pe |
Po |
Re |
Sk |
St |
Su |
Su |
Te |
Ve |
Vi |
Wh |
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Star sequence |
Ovu-Mir-750_5p* |
mirBase accession | None |
Sequence |
0- CGUUGGAAGGUUAGGUUUUCGCA -23
Get sequence
|
Mature sequence |
Ovu-Mir-750_3p |
mirBase accession | None |
Sequence |
40- CCAGAUCUAACUCUUCCAGCUCA -63
Get sequence
|