MirGeneDB 3.0

MirGeneDB ID

Tur-Mir-750

Family name MIR-750 (all species)
Seed CAGAUCU
Species Two-spotted spider mite (Tetranychus urticae)
MiRBase ID
Paralogues
Orthologues Aae-Mir-750  Aga-Mir-750  Agr-Mir-750  Asu-Mir-750  Ava-Mir-750-P9  Ava-Mir-750-P10  Bge-Mir-750  Bko-Mir-750  Bpl-Mir-750  Csc-Mir-750-P7  Csc-Mir-750-P8  Cte-Mir-750  Dgr-Mir-750  Dlo-Mir-750  Dma-Mir-750  Dpu-Mir-750  Eba-Mir-750  Efe-Mir-750-P1  Efe-Mir-750-P2  Efe-Mir-750-P3  Esc-Mir-750  Hme-Mir-750  Hru-Mir-750  Isc-Mir-750  Lan-Mir-750  Lgi-Mir-750  Llo-Mir-750  Lpo-Mir-750-P4  Lpo-Mir-750-P5  Lpo-Mir-750-P6  Mgi-Mir-750  Mom-Mir-750  Npo-Mir-750  Obi-Mir-750  Ofu-Mir-750  Ovu-Mir-750  Pau-Mir-750  Pca-Mir-750  Pcr-Mir-750  Pdu-Mir-750  Pve-Mir-750  Rph-Mir-750  Sma-Mir-750  Sme-Mir-750  Snu-Mir-750  Tca-Mir-750  War-Mir-750 
Node of Origin (locus) Protostomia
Node of Origin (family) Protostomia
Genome context
(GCA_000239435.1_ASM23943v1_genomic_TUR_traces)
HE587319.1: 654152-654217 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CAAACAAGUACGCAAAUCUGAAACUGAUCGAGUUGGAAGUCUAGAUCUAGACACUUAAAAUUAAACAUCGUUGCCAGAUCUAUCUCUUCCAGCUCUCUCAGGAUUCAGCCAUACUCAGUAUUUCAU
Get precursor sequence
Structure
        10         20         30        40         50        60  
CAAACAAGUACGCAAAU-     A-    UC          UC-|      AGACACUUAAAAU 
                  CUGAA  CUGA  GAGUUGGAAG   UAGAUCU             \
                  GACUU  GACU  CUCGACCUUC   AUCUAGA             U
UACUUUAUGACUCAUACC     AG    CU          UCU^      CCGUUGCUACAAA 
    120       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
 +
Ad Ad Ad Ad Ad Em To
Star sequence

Tur-Mir-750_5p*

mirBase accessionNone
Sequence
0- AGUUGGAAGUCUAGAUCUAGAC -22
Get sequence
Mature sequence

Tur-Mir-750_3p

mirBase accessionNone
Sequence
43- CCAGAUCUAUCUCUUCCAGCUCU -66
Get sequence