MirGeneDB 3.0
MirGeneDB ID

Pdu-Mir-750

Family name MIR-750 (all species)
Seed CAGAUCU
Species Dumerils clam worm (Platynereis dumerilii)
MiRBase ID
Paralogues
Orthologues Aae-Mir-750  Aga-Mir-750  Agr-Mir-750  Asu-Mir-750  Ava-Mir-750-P9  Ava-Mir-750-P10  Bge-Mir-750  Bko-Mir-750  Bpl-Mir-750  Csc-Mir-750-P7  Csc-Mir-750-P8  Cte-Mir-750  Dgr-Mir-750  Dlo-Mir-750  Dma-Mir-750  Dpu-Mir-750  Eba-Mir-750  Efe-Mir-750-P1  Efe-Mir-750-P2  Efe-Mir-750-P3  Esc-Mir-750  Hme-Mir-750  Hru-Mir-750  Isc-Mir-750  Lan-Mir-750  Lgi-Mir-750  Llo-Mir-750  Lpo-Mir-750-P4  Lpo-Mir-750-P5  Lpo-Mir-750-P6  Mgi-Mir-750  Mom-Mir-750  Npo-Mir-750  Obi-Mir-750  Ofu-Mir-750  Ovu-Mir-750  Pau-Mir-750  Pca-Mir-750  Pcr-Mir-750  Pve-Mir-750  Rph-Mir-750  Sma-Mir-750  Sme-Mir-750  Snu-Mir-750  Tca-Mir-750  Tur-Mir-750  War-Mir-750 
Node of Origin (locus) Protostomia
Node of Origin (family) Protostomia
Genome context
(GCA_026936325.1_EMBL_pdum_1.0)		 JAPTHN010000001.1: 113485472-113485529 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UCUGGAUUUCUGCCUGUGGGGCCCUGGGUCCGCUGGAAGCUUAGGUCUCCGCAGUGUCAUUCCUGCCAGAUCUAACUCUUCCAGCUCACCCAGGUUCCUCUGUUCUUCUUAAAGAUAU
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Structure
        10          20        30        40         50        
UCUGGAUUUCUGCCUGU--   GC       CC        C-|       CC   GUGU 
                   GGG  CCUGGGU  GCUGGAAG  UUAGGUCU  GCA    C
                   UCC  GGACCCA  CGACCUUC  AAUCUAGA  CGU    A
UAUAGAAAUUCUUCUUGUC   UU       CU        UC^       C-   CCUU 
      110       100        90        80        70         60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
24 24 24 24 24 36 36 36 36 36 48 48 48 48 48 6d 6d 6d 6d 72 72 72 72 72
Star sequence

Pdu-Mir-750_5p*
mirBase accessionNone
Sequence 
0- CGCUGGAAGCUUAGGUCUCCGCA -23
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Mature sequence

Pdu-Mir-750_3p
mirBase accessionNone
Sequence 
35- CCAGAUCUAACUCUUCCAGCUCA -58
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