MirGeneDB 3.0

MirGeneDB ID

Pca-Mir-750

Family name MIR-750 (all species)
Seed CAGAUCU
Species Penis worm (Priapulus caudatus)
MiRBase ID
Paralogues
Orthologues Aae-Mir-750  Aga-Mir-750  Agr-Mir-750  Asu-Mir-750  Ava-Mir-750-P9  Ava-Mir-750-P10  Bge-Mir-750  Bko-Mir-750  Bpl-Mir-750  Csc-Mir-750-P7  Csc-Mir-750-P8  Cte-Mir-750  Dgr-Mir-750  Dlo-Mir-750  Dma-Mir-750  Dpu-Mir-750  Eba-Mir-750  Efe-Mir-750-P1  Efe-Mir-750-P2  Efe-Mir-750-P3  Esc-Mir-750  Hme-Mir-750  Hru-Mir-750  Isc-Mir-750  Lan-Mir-750  Lgi-Mir-750  Llo-Mir-750  Lpo-Mir-750-P4  Lpo-Mir-750-P5  Lpo-Mir-750-P6  Mgi-Mir-750  Mom-Mir-750  Npo-Mir-750  Obi-Mir-750  Ofu-Mir-750  Ovu-Mir-750  Pau-Mir-750  Pcr-Mir-750  Pdu-Mir-750  Pve-Mir-750  Rph-Mir-750  Sma-Mir-750  Sme-Mir-750  Snu-Mir-750  Tca-Mir-750  Tur-Mir-750  War-Mir-750 
Node of Origin (locus) Protostomia
Node of Origin (family) Protostomia
Genome context
(Priapulus_caudatus_gca000485595v2)
KQ715266.1: 232539-232604 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGAGCGAGGGAGAGAGAGGCGGUCCGUGUGAGUUGGAAUUGUGGGUCUUGUGUUGCUGUUGGCAUUGCUGUUGCCAGAUCUAACUCUUCCAGCUCACACUGGCUCAUCCACGCAGCGCACGCACUC
Get precursor sequence
Structure
        10        20          30        40         50        60  
UGAGCGAGGGAGAGAGAGGC--    C             UU -|      U   UUGCUGUUG 
                      GGUC GUGUGAGUUGGAA  G UGGGUCU GUG         \
                      UCGG CACACUCGACCUU  C AUCUAGA CGU         G
CUCACGCACGCGACGCACCUAC    U             CU A^      C   UGUCGUUAC 
    120       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Gi In To
Star sequence

Pca-Mir-750_5p*

mirBase accessionNone
Sequence
0- AGUUGGAAUUGUGGGUCUUGUG -22
Get sequence
Mature sequence

Pca-Mir-750_3p

mirBase accessionNone
Sequence
43- CCAGAUCUAACUCUUCCAGCUCA -66
Get sequence