MirGeneDB 2.1
MirGeneDB ID

Lpo-Mir-278-P3

Family name MIR-278 (all species)
Seed CGGUGGG
Species Atlantic horseshoe crab (Limulus polyphemus)
MiRBase ID
Paralogues Lpo-Mir-278-P4  Lpo-Mir-278-P5 
Orthologues Aae-Mir-278  Bfl-Mir-278  Bge-Mir-278  Bla-Mir-278  Cgi-Mir-278  Csc-Mir-278  Cte-Mir-278  Dan-Mir-278  Dma-Mir-278  Dme-Mir-278  Dmo-Mir-278  Dpu-Mir-278  Dsi-Mir-278  Dya-Mir-278  Esc-Mir-278  Hme-Mir-278  Isc-Mir-278  Lan-Mir-278  Lgi-Mir-278  Npo-Mir-278  Obi-Mir-278  Ovu-Mir-278  Pfl-Mir-278  Pmi-Mir-278  Sko-Mir-278  Sme-Mir-278  Spu-Mir-278  Xbo-Mir-278 
Node of Origin (locus) L. polyphemus
Node of Origin (family) Bilateria
Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic)		 NW_013667338.1: 20482-20543 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
GGCAGCAGUGUCCCAAACAGUGUAAUGCGUCCGGACGAAGUUCUCACAACGGCCGUUAGGGUUUAUCAGGUCGGUGGGAUUUUCGUCCGUCUGUGUUGCAUUUGAAAAGUCAGCAUUUUCAU
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Structure
        10          20        30        40        50        60 
GGCAGCAGUGUCCCAAAC--|          UC         U      AA     GUUAGG 
                    AGUGUAAUGCG  CGGACGAAG UCUCAC  CGGCC      G
                    UUACGUUGUGU  GCCUGCUUU AGGGUG  GCUGG      U
UACUUUUACGACUGAAAAGU^          CU         U      --     ACUAUU 
120       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Fe Fe Fe Ma Ma To
Star sequence

Lpo-Mir-278-P3_5p*
mirBase accessionNone
Sequence 
0- CCGGACGAAGUUCUCACAACGGCC -24
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Mature sequence

Lpo-Mir-278-P3_3p
mirBase accessionNone
Sequence 
40- UCGGUGGGAUUUUCGUCCGUCU -62
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