MirGeneDB 2.1
MirGeneDB ID

Dsi-Mir-278

Family name MIR-278 (all species)
Seed CGGUGGG
Species Fruit fly (Drosophila simulans)
MiRBase ID dsi-mir-278
Paralogues
Orthologues Aae-Mir-278  Bfl-Mir-278  Bge-Mir-278  Bla-Mir-278  Cgi-Mir-278  Csc-Mir-278  Cte-Mir-278  Dan-Mir-278  Dma-Mir-278  Dme-Mir-278  Dmo-Mir-278  Dpu-Mir-278  Dya-Mir-278  Efe-Mir-278-P1-v1  Efe-Mir-278-P1-v2  Efe-Mir-278-P2  Esc-Mir-278  Hme-Mir-278  Isc-Mir-278  Lan-Mir-278  Lgi-Mir-278  Lpo-Mir-278-P3  Lpo-Mir-278-P4  Lpo-Mir-278-P5  Npo-Mir-278  Obi-Mir-278  Ovu-Mir-278  Pfl-Mir-278  Pmi-Mir-278  Sko-Mir-278  Sme-Mir-278  Spu-Mir-278  Xbo-Mir-278 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(Drosophila_simulans.ASM75419v3.dna.toplevel)		 2R: 12209961-12210021 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AUACGAGACCAUGGUAAUGGUACGGUGCGACCGGAUGAUGGUUCACAACGACCGUGUCCUUUAAACGGGUCGGUGGGACUUUCGUCCGUUUGUAACGCCAUUUGUCAACGAUUUAUCAGUG
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Structure
        10            20        30        40        50        60
AUACGAGACCAUGGUAA----|   ACGG     C       U     A  A     GUGUCC 
                     UGGU    UGCGA CGGAUGA GGUUC CA CGACC      U
                     ACCG    AUGUU GCCUGCU UCAGG GU GCUGG      U
GUGACUAUUUAGCAACUGUUU^   CA--     U       U     -  G     GCAAAU 
 .       110       100          90        80         70
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
He Wh
Star sequence

Dsi-Mir-278_5p*
mirBase accessionNone
Sequence 
0- CCGGAUGAUGGUUCACAACGACC -23
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Mature sequence

Dsi-Mir-278_3p
mirBase accessionMIMAT0008891
Sequence 
39- UCGGUGGGACUUUCGUCCGUUU -61
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