MirGeneDB 3.0
MirGeneDB ID

Llo-Mir-278-P6

Family name MIR-278 (all species)
Seed CGGUGGG
Species Bootlace worm (Lineus longissimus)
MiRBase ID
Paralogues Llo-Mir-278-P7 
Orthologues Aae-Mir-278  Aga-Mir-278  Agr-Mir-278  Ava-Mir-278  Bfl-Mir-278  Bge-Mir-278  Bla-Mir-278  Csc-Mir-278  Cte-Mir-278  Dan-Mir-278  Dgr-Mir-278  Dlo-Mir-278  Dma-Mir-278  Dme-Mir-278  Dmo-Mir-278  Dpu-Mir-278  Dsi-Mir-278  Dya-Mir-278  Eba-Mir-278  Esc-Mir-278  Gpa-Mir-278  Gsa-Mir-278  Hme-Mir-278  Hru-Mir-278  Isc-Mir-278  Lan-Mir-278  Lgi-Mir-278  Lhy-Mir-278  Mgi-Mir-278  Mom-Mir-278  Npo-Mir-278  Obi-Mir-278  Ofu-Mir-278  Ovu-Mir-278  Pau-Mir-278  Pca-Mir-278  Pcr-Mir-278  Pdu-Mir-278  Pfl-Mir-278  Pmi-Mir-278  Pve-Mir-278  Rph-Mir-278  Sko-Mir-278  Sme-Mir-278  Snu-Mir-278  Spu-Mir-278  Tur-Mir-278  War-Mir-278  Xbo-Mir-278 
Node of Origin (locus) Lineidae
Node of Origin (family) Bilateria
Genome context
(GCA_910592395.2_tnLinLong1)		 OU342993.1: 21374766-21374826 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
GCGAAAAUCAAAAUCAACCAUUGGUCGCAGCCGGUCGAAAGCCUCCGCCAAUCGUCAAGUUAUAAUUGAUCGGUGGGACUUUCGUUCGCUUGUGAUUAGUGGUAAAACACCAGGUCAUGGA
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Structure
        10          20        30        40        50        60
GCGAAAAUCAAAAUCAA--|            C  GU      C U     A   GUCAAG 
                   CCAUUGGUCGCAG CG  CGAAAG C CCGCC AUC      U
                   GGUGAUUAGUGUU GC  GCUUUC G GGUGG UAG      U
AGGUACUGGACCACAAAAU^            C  UU      A -     C   UUAAUA 
 .       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Sr Sr Sr Sr Sr Sr
Star sequence

Llo-Mir-278-P6_5p* (predicted)
mirBase accessionNone
Sequence 
0- CCGGUCGAAAGCCUCCGCCAAUC -23
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Mature sequence

Llo-Mir-278-P6_3p
mirBase accessionNone
Sequence 
39- UCGGUGGGACUUUCGUUCGCUU -61
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