MirGeneDB 3.0
MirGeneDB ID

Dan-Mir-278

Family name MIR-278 (all species)
Seed CGGAUGA
Species Fruit fly (Drosophila ananassae)
MiRBase ID dan-mir-278
Paralogues
Orthologues Aae-Mir-278  Aga-Mir-278  Agr-Mir-278  Ava-Mir-278  Bfl-Mir-278  Bge-Mir-278  Bla-Mir-278  Csc-Mir-278  Cte-Mir-278  Dgr-Mir-278  Dlo-Mir-278  Dma-Mir-278  Dme-Mir-278  Dmo-Mir-278  Dpu-Mir-278  Dsi-Mir-278  Dya-Mir-278  Eba-Mir-278  Efe-Mir-278-P1-v1  Efe-Mir-278-P1-v2  Efe-Mir-278-P2  Esc-Mir-278  Gpa-Mir-278  Gsa-Mir-278  Hme-Mir-278  Hru-Mir-278  Isc-Mir-278  Lan-Mir-278  Lgi-Mir-278  Lhy-Mir-278  Llo-Mir-278-P6  Llo-Mir-278-P7  Lpo-Mir-278-P3  Lpo-Mir-278-P4  Lpo-Mir-278-P5  Mgi-Mir-278  Mom-Mir-278  Npo-Mir-278  Obi-Mir-278  Ofu-Mir-278  Ovu-Mir-278  Pau-Mir-278  Pca-Mir-278  Pcr-Mir-278  Pdu-Mir-278  Pfl-Mir-278  Pmi-Mir-278  Pve-Mir-278  Rph-Mir-278  Sko-Mir-278  Sme-Mir-278  Snu-Mir-278  Spu-Mir-278  Tur-Mir-278  War-Mir-278  Xbo-Mir-278 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(Dana_caf1)		 scaffold_13266: 12641349-12641409 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AAUGUAUGUAACGGUAAUGGUACGGUGCGACCGGAUGAUGGUUCACAACGACCGUGUCCUUCGAACGGGUCGGUGGGACUUUCGUCCGUUUGUAACGCCAUUUGUCAGCGAUUUAUCAUCC
Get precursor sequence
Structure
        10            20        30        40        50        60
AAUGUAUGUAACGGUAA----|   ACGG     C       U     A  A     GUGUCC 
                     UGGU    UGCGA CGGAUGA GGUUC CA CGACC      U
                     ACCG    AUGUU GCCUGCU UCAGG GU GCUGG      U
CCUACUAUUUAGCGACUGUUU^   CA--     U       U     -  G     GCAAGC 
 .       110       100          90        80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
Fe
Mature sequence

Dan-Mir-278_5p
mirBase accessionNone
Sequence 
0- CCGGAUGAUGGUUCACAACGACC -23
Get sequence
Co-mature sequence

Dan-Mir-278_3p
mirBase accessionMIMAT0008470
Sequence 
39- UCGGUGGGACUUUCGUCCGUUU -61
Get sequence