| MirGeneDB ID | Lpo-Mir-92-P10 |
|---|
| Family name |
MIR-92 (all species) |
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| Seed |
AUUGCAC |
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| Species |
Atlantic horseshoe crab (Limulus polyphemus) |
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| MiRBase ID |
|
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| Paralogues |
Lpo-Mir-92-P9
Lpo-Mir-92-P11
|
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| Orthologues |
Asu-Mir-92
Cel-Mir-92
Esc-Mir-92
Isc-Mir-92
Obi-Mir-92
Sko-Mir-92-o10
Sme-Mir-92
|
|---|
| Node of Origin (locus) |
L. polyphemus
|
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| Node of Origin (family) |
Bilateria
|
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Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic) |
NW_013668673.1: 15232-15291 [+]
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
AUAUAAGAAGAAAUUUGAUGAACCUUAGGCAGGCCAGAAUGAGUGUCAAUGUUGGGUUCAUGGAAUAAUAUUGCACUCGUCCCGGCCUAUCUUGGGAUCUACAGAUUCAGCGGUUGGAGC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AUAUAAGAAGAAAUUUGAU--| A U GC AGA U GGGUUC
GA CCU AG AGGCC AUGAGUG CAAUGUU \
CU GGG UC UCCGG UGCUCAC GUUAUAA A
CGAGGUUGGCGACUUAGACAU^ A U UA CCC - UAAGGU
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Lpo-Mir-92-P10_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- AGGCCAGAAUGAGUGUCAAUGUU -23
Get sequence
|
|---|
| Mature sequence |
Lpo-Mir-92-P10_3p |
| mirBase accession | None |
|---|
| Sequence |
38- UAUUGCACUCGUCCCGGCCUAU -60
Get sequence
|
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