| MirGeneDB ID | Bge-Mir-252-P2-v2 |
|---|
| Family name |
MIR-252 (all species) |
|---|
| Seed |
AAGUACU |
|---|
| Species |
Cockroach (Blattella germanica) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
Bge-Mir-252-P1
Bge-Mir-252-P2-v1
|
|---|
| Orthologues |
Aae-Mir-252-P2
Bfl-Mir-252-P2
Bla-Mir-252-P2
Cbr-Mir-252-P2
Cel-Mir-252-P2
Cgi-Mir-252-P2
Csc-Mir-252-P2
Cte-Mir-252-P2
Dan-Mir-252-P2-v1
Dan-Mir-252-P2-v2
Dma-Mir-252-P2
Dme-Mir-252-P2-v1
Dme-Mir-252-P2-v2
Dmo-Mir-252-P2-v1
Dmo-Mir-252-P2-v2
Dpu-Mir-252-P2-v1
Dpu-Mir-252-P2-v2
Dsi-Mir-252-P2-v1
Dsi-Mir-252-P2-v2
Dya-Mir-252-P2-v1
Dya-Mir-252-P2-v2
Hme-Mir-252-P2
Isc-Mir-252-P2-v1
Isc-Mir-252-P2-v2
Lan-Mir-252-P2
Lgi-Mir-252-P2
Lpo-Mir-252-P2c
Lpo-Mir-252-P2d
Npo-Mir-252-P2
Pfl-Mir-252-P2
Pmi-Mir-252-P2
Sko-Mir-252-P2
Spu-Mir-252-P2
Tca-Mir-252-P2
Xbo-Mir-252-P2g
Xbo-Mir-252-P2h
|
|---|
| Node of Origin (locus) |
Bilateria
|
|---|
| Node of Origin (family) |
Bilateria
|
|---|
Genome context
(Bger_2.0) |
KZ617672.1: 79352-79411 [-]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
GAGCACUGAAGACAAACCCUCUUCCGUUCCUAAGUACUAGUGCCGCAGGAGUGUGCUUGAGUAAUUUCUCCUGCUGCUCAAGUGCUUAUCAAUGGGAAGGGACGCCCUCCAAUGGAUGAG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GAGCACUGAAGACAAAC--| UC CC AGU C UGUGCUU
CC UUCCGUU UAAGUACU GC GCAGGAG G
GG AGGGUAA AUUCGUGA CG CGUCCUC A
GAGUAGGUAACCUCCCGCA^ GA CU ACU U UUUAAUG
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
| Ad |
Ad |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ov |
Co |
Co |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
No |
No |
| |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|---|
| Mature sequence |
Bge-Mir-252-P2-v2_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UAAGUACUAGUGCCGCAGGAGUG -23
Get sequence
|
|---|
| Star sequence |
Bge-Mir-252-P2-v2_3p* |
| mirBase accession | None |
|---|
| Sequence |
37- CUCCUGCUGCUCAAGUGCUUAUC -60
Get sequence
|
|---|
