MirGeneDB 3.0
MirGeneDB ID

Pve-Mir-33-P17a

Family name MIR-33 (all species)
Seed UGCAUUG
Species Vernerds tusk shell (Pictodentalium vernedei)
MiRBase ID
Paralogues Pve-Mir-33-P17b 
Orthologues Aae-Mir-33  Aga-Mir-33  Ava-Mir-33  Bge-Mir-33  Cin-Mir-33  Csc-Mir-33  Cte-Mir-33  Dan-Mir-33  Dgr-Mir-33  Dlo-Mir-33  Dma-Mir-33  Dme-Mir-33  Dmo-Mir-33  Dpu-Mir-33  Dsi-Mir-33  Dya-Mir-33  Eba-Mir-33  Ebu-Mir-33  Efe-Mir-33  Egr-Mir-33  Esc-Mir-33  Gpa-Mir-33  Gsp-Mir-33  Hru-Mir-33  Isc-Mir-33  Lgi-Mir-33  Llo-Mir-33  Mgi-Mir-33  Mom-Mir-33  Npo-Mir-33  Obi-Mir-33  Ofu-Mir-33  Ovu-Mir-33  Pau-Mir-33  Pca-Mir-33  Pcr-Mir-33  Pdu-Mir-33  Pfl-Mir-33  Pmi-Mir-33  Sko-Mir-33  Snu-Mir-33  Spu-Mir-33  Tca-Mir-33  War-Mir-33  Xbo-Mir-33 
Node of Origin (locus) Dentaliidae
Node of Origin (family) Bilateria
Genome context
(PVE_manual_microRNAloci)		 CM062297.1:10269390-10269648: 101-159 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AGGAGUAAGGUGACCGUGGCUGUAACAAUGGUGCAUUGUAGUUGCAUUGCAUUAGCAAUAAAUUAUGCAAUGCAUCUGCAGUGUAAUCAUUGAUUCAGUACCAAGCAGCAAGUUAUACA
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Structure
        10          20        30         40        50        
AGGAGUAAGGUGACCGUG--    UAA      -|         U         UUAGCA 
                    GCUG   CAAUGG UGCAUUGUAG UGCAUUGCA      A
                    UGAC   GUUACU AUGUGACGUC ACGUAACGU      U
ACAUAUUGAACGACGAACCA    UUA      A^         U         AUUAAA 
       110       100        90        80        70        60
Deep sequencing
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CommentThe 3p arm appears to be monoadenylated.
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Pve-Mir-33-P17a_5p
mirBase accessionNone
Sequence 
0- GUGCAUUGUAGUUGCAUUGCA -21
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Star sequence

Pve-Mir-33-P17a_3p*
mirBase accessionNone
Sequence 
37- CAAUGCAUCUGCAGUGUAAUCA -59
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