MirGeneDB 3.0
MirGeneDB ID

Pve-Mir-1-P28

Family name MIR-1 (all species)
Seed GGAAUGU
Species Vernerds tusk shell (Pictodentalium vernedei)
MiRBase ID
Paralogues Pve-Mir-1-P27 
Orthologues Aae-Mir-1  Aga-Mir-1  Agr-Mir-1  Asu-Mir-1  Bfl-Mir-1  Bge-Mir-1  Bla-Mir-1  Cbr-Mir-1  Cel-Mir-1  Cin-Mir-1  Cte-Mir-1  Dan-Mir-1  Dgr-Mir-1  Dlo-Mir-1  Dma-Mir-1  Dme-Mir-1  Dmo-Mir-1  Dpu-Mir-1  Dsi-Mir-1  Dya-Mir-1  Eba-Mir-1  Egr-Mir-1  Esc-Mir-1  Gpa-Mir-1  Gsa-Mir-1  Gsp-Mir-1  Hme-Mir-1  Hmi-Mir-1  Hru-Mir-1  Isc-Mir-1  Lan-Mir-1  Lgi-Mir-1  Lhy-Mir-1  Llo-Mir-1  Mgi-Mir-1  Mom-Mir-1  Obi-Mir-1  Ofu-Mir-1  Ovu-Mir-1  Pau-Mir-1  Pca-Mir-1  Pcr-Mir-1  Pdu-Mir-1  Pfl-Mir-1  Ple-Mir-1  Pmi-Mir-1  Rph-Mir-1  Sko-Mir-1  Sma-Mir-1  Sne-Mir-1  Snu-Mir-1  Spu-Mir-1  Sro-Mir-1  Tca-Mir-1  Tur-Mir-1  War-Mir-1  Xbo-Mir-1 
Node of Origin (locus) Dentaliidae
Node of Origin (family) Bilateria
Genome context
(PVE_manual_microRNAloci)		 CM062290.1:454114149-454114408: 101-160 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UUCUUGUACAUGGAGAUAUGUGUGCAGGAUACAUACUUCCUUAUUAUUCCAUAUAUUAAAAAUAGUUAUGGAAUGUAAAGAAGUAUGUGUCAUGUACAUUACAGAUCAACAGAUAGCUUU
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Structure
        10          20        30        40        50          
UUCUUGUACAUGGAGAUAU--|      G            C    U        UAUUAA 
                     GUGUGCA GAUACAUACUUC UUAU AUUCCAUA      \
                     UACAUGU CUGUGUAUGAAG AAUG UAAGGUAU      A
UUUCGAUAGACAACUAGACAU^      A            A    -        UGAUAA 
.       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Pve-Mir-1-P28_5p* (predicted)
mirBase accessionNone
Sequence 
0- ACAUACUUCCUUAUUAUUCCAUA -23
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Mature sequence

Pve-Mir-1-P28_3p
mirBase accessionNone
Sequence 
38- UGGAAUGUAAAGAAGUAUGUGU -60
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