MirGeneDB 3.0

MirGeneDB ID

Pve-Mir-92-o102

Family name MIR-92 (all species)
Seed AUUGCAC
Species Vernerds tusk shell (Pictodentalium vernedei)
MiRBase ID
Paralogues Pve-Mir-92-o98  Pve-Mir-92-o99  Pve-Mir-92-o100  Pve-Mir-92-o101 
Orthologues Asu-Mir-92  Cel-Mir-92  Esc-Mir-92  Gsp-Mir-92  Hmi-Mir-92  Isc-Mir-92  Obi-Mir-92  Sme-Mir-92 
Node of Origin (locus) Dentaliidae
Node of Origin (family) Bilateria
Genome context
(PVE_manual_microRNAloci)
CM062292.1:212004109-212004370: 101-162 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UUGCUUUUAGAGAGUUCCUGGCUUUUGUUCAGAGACUGGGAUGGGCACAAUGCUGAUACUUUAAAACUAGUAUUGCACUCGUCCCGGCCUGUUAACAUGAGCAGCUAUCCACCAGUUUUAUU
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Structure
        10        20        30        40        50        60 
UUGCUUUUAGAGAGUUCCUG|   U    CAG  A          CA       GAUACU 
                    GCUU UGUU   AG CUGGGAUGGG  CAAUGCU      U
                    CGAG ACAA   UC GGCCCUGCUC  GUUAUGA      U
UUAUUUUGACCACCUAUCGA^   U    UUG  C          AC       UCAAAA 
120       110       100        90        80        70
Deep sequencing
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CommentIt is not clear either from phylogenetic or syntenic information how many Mir-92 genes were present in the last common ancestor of bilaterians and how the vertebrate Mir-92s relate to the invertebrate Mir-92s and thus these multiple paralogues in invertebrates are classified here as oPveans pending additional data.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Star sequence

Pve-Mir-92-o102_5p* (predicted)

mirBase accessionNone
Sequence
0- AGAGACUGGGAUGGGCACAAUGCU -24
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Mature sequence

Pve-Mir-92-o102_3p

mirBase accessionNone
Sequence
40- UAUUGCACUCGUCCCGGCCUGU -62
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