| MirGeneDB ID | Pve-Mir-92-o101 |
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| Family name |
MIR-92 (all species) |
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| Seed |
AUUGCAC |
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| Species |
Vernerds tusk shell (Pictodentalium vernedei) |
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| MiRBase ID |
|
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| Paralogues |
Pve-Mir-92-o98
Pve-Mir-92-o99
Pve-Mir-92-o100
Pve-Mir-92-o102
|
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| Orthologues |
Asu-Mir-92
Cel-Mir-92
Esc-Mir-92
Gsp-Mir-92
Hmi-Mir-92
Isc-Mir-92
Obi-Mir-92
Sme-Mir-92
|
|---|
| Node of Origin (locus) |
Dentaliidae
|
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| Node of Origin (family) |
Bilateria
|
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Genome context
(PVE_manual_microRNAloci) |
CM062292.1:212132107-212132364: 101-158 [+]
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
UAUUGUUGUCGGUGACAAAGUGGAUGUUGUCGGUCUUGGCGGAUGCAAUCUGUAUUUGUUCUAUCAAAUUGCACUCGUCCCGGCCUGCUGCAUCUAUGAUAAUCGUCAGUAACAAAUG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UAUUGUUGUCGGUGACAAA--| U C UU GA C UAUUU
GUGGAUGU GU GGUC GGCG UGCAAU UG G
UAUCUACG CG CCGG CUGC ACGUUA AC U
GUAAACAAUGACUGCUAAUAG^ U U CC UC A UAUCU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| Comment | It is not clear either from phylogenetic or syntenic information how many Mir-92 genes were present in the last common ancestor of bilaterians and how the vertebrate Mir-92s relate to the invertebrate Mir-92s and thus these multiple paralogues in invertebrates are classified here as oPveans pending additional data. |
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Pve-Mir-92-o101_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- CGGUCUUGGCGGAUGCAAUCUG -22
Get sequence
|
|---|
| Mature sequence |
Pve-Mir-92-o101_3p |
| mirBase accession | None |
|---|
| Sequence |
36- AAUUGCACUCGUCCCGGCCUGC -58
Get sequence
|
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