MirGeneDB 3.0
MirGeneDB ID

Pve-Mir-216-P1

Family name MIR-216 (all species)
Seed AAUAUCA
Species Vernerds tusk shell (Pictodentalium vernedei)
MiRBase ID
Paralogues Pve-Mir-216-P2d 
Orthologues Aae-Mir-216-P1  Aga-Mir-216-P1  Agr-Mir-216-P1  Asu-Mir-216-P1  Bge-Mir-216-P1  Cte-Mir-216-P1  Dan-Mir-216-P1  Dgr-Mir-216-P1  Dlo-Mir-216-P1  Dma-Mir-216-P1  Dme-Mir-216-P1  Dmo-Mir-216-P1  Dpu-Mir-216-P1  Dsi-Mir-216-P1  Dya-Mir-216-P1  Eba-Mir-216-P1  Efe-Mir-216-P1a  Efe-Mir-216-P1b  Esc-Mir-216-P1  Gpa-Mir-216-P1  Hme-Mir-216-P1  Hru-Mir-216-P1  Lan-Mir-216-P1e  Lan-Mir-216-P1f  Lgi-Mir-216-P1  Lhy-Mir-216-P1  Mgi-Mir-216-P1  Mom-Mir-216-P1  Ofu-Mir-216-P1  Pau-Mir-216-P1  Pca-Mir-216-P1  Pcr-Mir-216-P1  Pdu-Mir-216-P1  Rph-Mir-216-P1  Sma-Mir-216-P1  Snu-Mir-216-P1  Tca-Mir-216-P1  War-Mir-216-P1 
Node of Origin (locus) Nephrozoa
Node of Origin (family) Nephrozoa
Genome context
(PVE_manual_microRNAloci)		 CM062292.1:380949573-380949832: 101-160 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
GCACACAGAUGAUGUAUUGUGUUGGUUUUUUAAUAUCAGCUGGUAAUCUGGAGAGGAUUAUAGAAACUCUAGAUACUGGGUGAUAUUUCAAAAACAGUCAUACAAGCAAAUAUACAUAUG
Get precursor sequence
Structure
        10         20        30         40        50          
GCACACAGAUGAUGUAU-    UUG      U-|      G UG   A       AGGAUU 
                  UGUG   GUUUUU  AAUAUCA C  GUA UCUGGAG      \
                  AUAC   CAAAAA  UUAUAGU G  CAU AGAUCUC      A
GUAUACAUAUAAACGAAC    UGA      CU^      G GU   -       AAAGAU 
.       110       100        90        80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
-   +
To
Mature sequence

Pve-Mir-216-P1_5p
mirBase accessionNone
Sequence 
0- UAAUAUCAGCUGGUAAUCUGGAG -23
Get sequence
Star sequence

Pve-Mir-216-P1_3p*
mirBase accessionNone
Sequence 
38- CUAGAUACUGGGUGAUAUUUCA -60
Get sequence