MirGeneDB 2.1
MirGeneDB ID

Efe-Mir-216-P1a

Family name MIR-216 (all species)
Seed AAUAUCA
Species Common brandling worm (Eisenia fetida)
MiRBase ID
Paralogues Efe-Mir-216-P1b  Efe-Mir-216-P2 
Orthologues Aae-Mir-216-P1  Asu-Mir-216-P1  Bge-Mir-216-P1  Cgi-Mir-216-P1  Cte-Mir-216-P1  Dan-Mir-216-P1  Dma-Mir-216-P1  Dme-Mir-216-P1  Dmo-Mir-216-P1  Dpu-Mir-216-P1  Dsi-Mir-216-P1  Dya-Mir-216-P1  Esc-Mir-216-P1  Hme-Mir-216-P1  Lgi-Mir-216-P1  Tca-Mir-216-P1 
Node of Origin (locus) E. fetida
Node of Origin (family) Bilateria
Genome context
(Efe_combined)		 Efet.01.10466: 6597-6657 [-]
Precursor
(pre-Mir +30nt flank)
UGAAUGAGCUCCGCUUGGAAGUUGUCUGUUUAAUAUCAGCAGGUAAAUCUGAGCUAAACGACAGAAUCUCAGAGUGCCGCCUGGUAUUGUCCAGACAACGCAUGCUGUCAACAGCGAAGUC
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Structure
        10        20          30        40        50        60
UGAAUGAGCUCCGCUUGGAA--|       UU         CA    AA      CUAAAC 
                      GUUGUCUG  UAAUAUCAG  GGUA  UCUGAG      G
                      CAACAGAC  GUUAUGGUC  CCGU  AGACUC      A
CUGAAGCGACAACUGUCGUACG^       CU         CG    G-      UAAGAC 
 .       110       100        90        80         70
Deep sequencing
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CommentThere is a second Dicer cut +1 on both arms.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Efe-Mir-216-P1a_5p
mirBase accessionNone
Sequence 
0- UAAUAUCAGCAGGUAAAUCUGAG -23
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Star sequence

Efe-Mir-216-P1a_3p*
mirBase accessionNone
Sequence 
39- CAGAGUGCCGCCUGGUAUUGUC -61
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