Mir-216-P1

MirGeneDB ID

Eba-Mir-216-P1

Family name

MIR-216 (all species)

Seed

AAUAUCA

Species

Epimenia (Solenogaster) (Epimenia babai)

MiRBase ID

Paralogues

Eba-Mir-216-P2c

Orthologues

Aae-Mir-216-P1 Aga-Mir-216-P1 Agr-Mir-216-P1 Asu-Mir-216-P1 Bge-Mir-216-P1 Cte-Mir-216-P1 Dan-Mir-216-P1 Dgr-Mir-216-P1 Dlo-Mir-216-P1 Dma-Mir-216-P1 Dme-Mir-216-P1 Dmo-Mir-216-P1 Dpu-Mir-216-P1 Dsi-Mir-216-P1 Dya-Mir-216-P1 Efe-Mir-216-P1a Efe-Mir-216-P1b Esc-Mir-216-P1 Gpa-Mir-216-P1 Hme-Mir-216-P1 Hru-Mir-216-P1 Lan-Mir-216-P1e Lan-Mir-216-P1f Lgi-Mir-216-P1 Lhy-Mir-216-P1 Mgi-Mir-216-P1 Mom-Mir-216-P1 Ofu-Mir-216-P1 Pau-Mir-216-P1 Pca-Mir-216-P1 Pcr-Mir-216-P1 Pdu-Mir-216-P1 Pve-Mir-216-P1 Rph-Mir-216-P1 Sma-Mir-216-P1 Snu-Mir-216-P1 Tca-Mir-216-P1 War-Mir-216-P1

Node of Origin (locus)

Bilateria

Node of Origin (family)

Nephrozoa

Genome context
(GCA_011762755.2_ASM1176275v2_Epimenia)

WURV02156550.1: 13414-13471 [+] Ensembl

Precursor
(pre-Mir +30nt flank)

GGUGACCUAGUUCUUGUAGCCACGGCGACUUAAUAUCAGCUGGUAAUUCUGAAGGGGAAGCAAUUCAGGAUUCUUGCUGAUAUUUUAGUAGACUUGGCAAACUUCCCUCUUGUCACUU

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Structure

        10          20        30         40        50        
GGUGACCUAGUUCUUGUA--    CGGCG   U-|        U  U        AGGGG 
                    GCCA     ACU  AAUAUCAGC GG AAUUCUGA     A
                    CGGU     UGA  UUAUAGUCG UC UUAGGACU     A
UUCACUGUUCUCCCUUCAAA    UCAGA   UU^        U  -        UAACG 
      110       100        90        80         70        60

Deep sequencing

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3' NTU

Unknown

Motifs

CNNC at 3p(+17)

Tissue expression

To

Mature sequence

Eba-Mir-216-P1_5p

mirBase accession

None

Sequence

0- UAAUAUCAGCUGGUAAUUCUGA -22

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Star sequence

Eba-Mir-216-P1_3p* (predicted)

mirBase accession

None

Sequence

36- AGGAUUCUUGCUGAUAUUUUAG -58

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