MirGeneDB 3.0

MirGeneDB ID

Pca-Mir-216-P1

Family name MIR-216 (all species)
Seed AAUCUCA
Species Penis worm (Priapulus caudatus)
MiRBase ID
Paralogues Pca-Mir-216-P2 
Orthologues Aae-Mir-216-P1  Aga-Mir-216-P1  Agr-Mir-216-P1  Asu-Mir-216-P1  Bge-Mir-216-P1  Cte-Mir-216-P1  Dan-Mir-216-P1  Dgr-Mir-216-P1  Dlo-Mir-216-P1  Dma-Mir-216-P1  Dme-Mir-216-P1  Dmo-Mir-216-P1  Dpu-Mir-216-P1  Dsi-Mir-216-P1  Dya-Mir-216-P1  Eba-Mir-216-P1  Efe-Mir-216-P1a  Efe-Mir-216-P1b  Esc-Mir-216-P1  Gpa-Mir-216-P1  Hme-Mir-216-P1  Hru-Mir-216-P1  Lan-Mir-216-P1e  Lan-Mir-216-P1f  Lgi-Mir-216-P1  Lhy-Mir-216-P1  Mgi-Mir-216-P1  Mom-Mir-216-P1  Ofu-Mir-216-P1  Pau-Mir-216-P1  Pcr-Mir-216-P1  Pdu-Mir-216-P1  Pve-Mir-216-P1  Rph-Mir-216-P1  Sma-Mir-216-P1  Snu-Mir-216-P1  Tca-Mir-216-P1  War-Mir-216-P1 
Node of Origin (locus) Nephrozoa
Node of Origin (family) Nephrozoa
Genome context
(Priapulus_caudatus_gca000485595v2)
KQ715627.1: 149119-149185 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCAACACGUAAAGGCAACCUGCUGACGGCAAAAUCUCAGCUGGUAGAUCUGGGUAUGAAUUACAUAACAAAUCCCCAGAAUACCUGCAGAGAUUCCUCCGUCACGGGCCGACCACCAGCCCCUCCCG
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Structure
        10           20        30        40        50        60   
GCAACACGUAAAGGCAA---|   C      CAA      A  U    GA      UAUGAAUUA 
                    CCUG UGACGG   AAUCUC GC GGUA  UCUGGG         C
                    GGGC ACUGCC   UUAGAG CG CCAU  AGACCC         A
GCCCUCCCCGACCACCAGCC^   -      UCC      A  U    A-      CUAAACAAU 
     120       110        100        90        80         70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
 +
Gi In To
Mature sequence

Pca-Mir-216-P1_5p (predicted)

mirBase accessionNone
Sequence
0- AAAUCUCAGCUGGUAGAUCUGGG -23
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Star sequence

Pca-Mir-216-P1_3p* (predicted)

mirBase accessionNone
Sequence
45- CAGAAUACCUGCAGAGAUUCCU -67
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