MirGeneDB 3.0
MirGeneDB ID

Gpa-Mir-87-P2-v2

Family name MIR-87 (all species)
Seed GAGCAAA
Species Tsetse fly (Glossina pallidipes)
MiRBase ID
Paralogues Gpa-Mir-87-P2-v1 
Orthologues Aae-Mir-87-P2  Aga-Mir-87-P2  Bge-Mir-87-P2a  Bge-Mir-87-P2b  Cbr-Mir-87-o2  Cel-Mir-87-o2  Csc-Mir-87-P2k  Csc-Mir-87-P2l  Cte-Mir-87-P2  Dan-Mir-87-P2-v1  Dan-Mir-87-P2-v2  Dgr-Mir-87-P2  Dlo-Mir-87-P2  Dme-Mir-87-P2-v1  Dme-Mir-87-P2-v2  Dmo-Mir-87-P2-v1  Dmo-Mir-87-P2-v2  Dsi-Mir-87-P2-v1  Dsi-Mir-87-P2-v2  Dya-Mir-87-P2-v1  Dya-Mir-87-P2-v2  Gsp-Mir-87  Hme-Mir-87-P2  Hru-Mir-87-P2  Isc-Mir-87-P2  Lan-Mir-87-P2  Lpo-Mir-87-P2c  Lpo-Mir-87-P2d  Lpo-Mir-87-P2e  Lpo-Mir-87-P2f  Lpo-Mir-87-P2g  Lpo-Mir-87-P2h  Lpo-Mir-87-P2i  Lpo-Mir-87-P2j  Mgi-Mir-87-P2  Ofu-Mir-87-P2  Pau-Mir-87-P2  Pve-Mir-87-P2  Sne-Mir-87  Snu-Mir-87-P2  Tca-Mir-87-P2 
Node of Origin (locus) Protostomia
Node of Origin (family) Protostomia
Genome context
(GpalI1)		 Scaffold60: 202315-202381 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AUUUCCUAAUUUUAAGCCGAUUUAUUUCAUUCGCACCUGUAUCUUGCUCAACCGUUACUUAUAUAAAAUCCGGUUGAGCAAAAUUUCAGGUGUGUGAGAAAUUCAUCUAAGAAUCAACGGCCAAAGU
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Structure
        10          20        30        40         50        60  
AUUUCCUAAUUUUAAGCC--   UU     AUU        U-| C         CGUUACUUA 
                    GAU  AUUUC   CGCACCUG  AU UUGCUCAAC         U
                    CUA  UAAAG   GUGUGGAC  UA AACGAGUUG         A
UGAAACCGGCAACUAAGAAU   CU     AGU        UU^ A         GCCUAAAAU 
     120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl
Star sequence

Gpa-Mir-87-P2-v2_5p*
mirBase accessionNone
Sequence 
0- UCGCACCUGUAUCUUGCUCAAC -22
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Mature sequence

Gpa-Mir-87-P2-v2_3p
mirBase accessionNone
Sequence 
44- UGAGCAAAAUUUCAGGUGUGUGA -67
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