MirGeneDB 2.1

22 microRNA genes with node of origin L. oculatus
Sort by genome coordinates Motifs
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC
Loc-Mir-7-P4-as None MIR-7 GGUAGAC None None LG19 114192 114256 - L. oculatus Bilateria No 1
Loc-Mir-15-P1c-as None MIR-15 AAACCAU None None LG7 45848215 45848272 + L. oculatus Olfactores No 1 1
Loc-Mir-31-P8 None MIR-31 GGCAAGA None None LG4 45815911 45815970 + L. oculatus Bilateria No 1
Loc-Mir-31-P9 None MIR-31 GGCAAGA None None LG4 59481960 59482019 + L. oculatus Bilateria No
Loc-Mir-193-P1b-as None MIR-193 CCUCGCC None None LG10 41575613 41575675 - L. oculatus Bilateria No
Loc-Mir-205-P4-as None MIR-205 CUUCACA None None LG3 30391197 30391254 + L. oculatus Vertebrata No
Loc-Mir-208-P1c None MIR-208 UAAGACG None None None None None None L. oculatus Vertebrata No
Loc-Mir-208-P1d None MIR-208 UAAGACG None None None None None None L. oculatus Vertebrata No
Loc-Mir-208-P1e None MIR-208 UAAGACG None None None None None None L. oculatus Vertebrata No
Loc-Mir-430-o31 None MIR-430 AAGUGCU None None LG7 14528433 14528491 - L. oculatus Vertebrata No
Loc-Mir-430-o32 None MIR-430 AAGUGCU None None LG7 14528223 14528281 - L. oculatus Vertebrata No
Loc-Mir-727-P3-v1 None MIR-727 CAGUCUU None None LG14 8060648 8060713 + L. oculatus Osteichthyes No
Loc-Mir-727-P3-v2 None MIR-727 UUGAGGC None None LG14 8060650 8060711 + L. oculatus Osteichthyes No 1 1
Loc-Mir-727-P4-v1 None MIR-727 CAGUCUU None None LG14 13263402 13263467 + L. oculatus Osteichthyes No
Loc-Mir-727-P4-v2 None MIR-727 UUGAGGC None None LG14 13263404 13263465 + L. oculatus Osteichthyes No 1
Loc-Novel-1 None LOC-NOVEL-1 UACUUGU None None LG1 26020721 26020777 + L. oculatus L. oculatus No 1
Loc-Novel-2 None LOC-NOVEL-2 UAUGGGA None None LG10 2472995 2473051 - L. oculatus L. oculatus No 1
Loc-Novel-3 None LOC-NOVEL-3 AAAGAUU None None LG11 30596926 30596984 + L. oculatus L. oculatus No
Loc-Novel-4 None LOC-NOVEL-4 GAAUGUC None None LG21 5365345 5365401 + L. oculatus L. oculatus No
Loc-Novel-5 None LOC-NOVEL-5 UCUGUUG None None LG4 14294705 14294762 + L. oculatus L. oculatus No 1
Loc-Novel-6 None LOC-NOVEL-6 GUCUGAC None None LG5 24780936 24780993 + L. oculatus L. oculatus No 1
Loc-Novel-7 None LOC-NOVEL-6 AAAGUGA None None LG7 23411437 23411494 - L. oculatus L. oculatus No

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