MirGeneDB 3.0
MirGeneDB ID

Cel-Mir-85

Family name MIR-85 (all species)
Seed ACAAAGU
Species Roundworm (Caenorhabditis elegans)
MiRBase ID cel-mir-85
Paralogues
Orthologues Cbr-Mir-85 
Node of Origin (locus) Caenorhabditis
Node of Origin (family) Caenorhabditis
Genome context
(ce11)		 chrII: 8393575-8393640 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCGUAUUCUAUAGAAUUUUGGCGUCGGAGCCCGAUUUUUCAAUAGUUUGAAACCAGUGUACACAUAAAUGGUUACAAAGUAUUUGAAAAGUCGUGCUCUGAAAAUGAAUUCUUACAUGAUCUUCUU
Get precursor sequence
Structure
        10        20          30        40         50        60  
UCGUAUUCUAUAGAAUUUUGGCG--       C         -|   G    A   CAGUGUAC 
                         UCGGAGC CGAUUUUUC AAUA UUUG AAC        \
                         AGUCUCG GCUGAAAAG UUAU AAAC UUG        A
UUCUUCUAGUACAUUCUUAAGUAAA       U         U^   G    A   GUAAAUAC 
    120       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
-   +
Da Ea Mi Wi Yo Yo
Star sequence

Cel-Mir-85_5p*
mirBase accessionMIMAT0020324
Sequence 
0- CCGAUUUUUCAAUAGUUUGAAAC -23
Get sequence
Mature sequence

Cel-Mir-85_3p
mirBase accessionMIMAT0000058
Sequence 
42- UACAAAGUAUUUGAAAAGUCGUGC -66
Get sequence
Proposed targets microrna.org: MIMAT0000058
TargetScanWorm: cel-miR-85