MirGeneDB 3.0
MirGeneDB ID

Cbr-Mir-9-P14

Family name MIR-9 (all species)
Seed UAAAGCU
Species Roundworm (Caenorhabditis briggsae)
MiRBase ID cbr-mir-75
Paralogues Cbr-Mir-9-P15  Cbr-Mir-9-P16 
Orthologues Agr-Mir-9  Bfl-Mir-9  Bko-Mir-9  Bla-Mir-9  Bpl-Mir-9  Cel-Mir-9-P14  Cin-Mir-9  Cte-Mir-9  Dgr-Mir-9  Eba-Mir-9  Egr-Mir-9  Esc-Mir-9  Gsa-Mir-9  Gsp-Mir-9  Hmi-Mir-9  Hru-Mir-9  Isc-Mir-9  Lan-Mir-9  Lgi-Mir-9  Llo-Mir-9  Mom-Mir-9  Npo-Mir-9  Obi-Mir-9  Ofu-Mir-9  Ovu-Mir-9  Pau-Mir-9  Pdu-Mir-9  Pmi-Mir-9  Pve-Mir-9  Rph-Mir-9  Sma-Mir-9  Snu-Mir-9  Spu-Mir-9  War-Mir-9  Xbo-Mir-9 
Node of Origin (locus) Caenorhabditis
Node of Origin (family) Bilateria
Genome context
(CB4)		 X: 4419753-4419815 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-9-P14)		 Mir-9-P14 X: 4419753-4419815 [-] Ensembl
Mir-785-P2 X: 4421255-4421318 [+] Ensembl
Mir-73-P2b X: 4426608-4426674 [-] Ensembl
Mir-73-P2a X: 4426739-4426799 [-] Ensembl
Mir-73-P1a X: 4426903-4426964 [-] Ensembl
Mir-2231 X: 4430575-4430638 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UUCCUGAAUUUUUUCUGCGAGACCGAAUUGCAGUCGGUUGCAAGCUUCAAUACAGACAAUGGUUCUUGAUAUUAAAGCUACCAACCGCCUUCAAAUCGUGCAUCGCGAUUUGGCAAAACAACA
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Structure
        10         20         30        40        50        60 
UUCCUGAAUUUUUUCUG-   GAC-|  A   C  U      CA     C    CAGACAAU 
                  CGA    CGA UUG AG CGGUUG  AGCUU AAUA        \
                  GCU    GCU AAC UC GCCAAC  UCGAA UUAU        G
ACAACAAAACGGUUUAGC   ACGU^  A   U  C      CA     A    AGUUCUUG 
 120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Ea Ma Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Yo Yo
Star sequence

Cbr-Mir-9-P14_5p*
mirBase accessionNone
Sequence 
0- CAGUCGGUUGCAAGCUUCAAUA -22
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Mature sequence

Cbr-Mir-9-P14_3p
mirBase accessionMIMAT0000484
Sequence 
41- UUAAAGCUACCAACCGCCUUCA -63
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