MirGeneDB 2.1
MirGeneDB ID

Cbr-Mir-73-P1a

Family name MIR-73 (all species)
Seed GGCAAGA
Species Roundworm (Caenorhabditis briggsae)
MiRBase ID cbr-mir-73a
Paralogues Cbr-Mir-73-P1b  Cbr-Mir-73-P2a  Cbr-Mir-73-P2b  Cbr-Mir-73-P3a  Cbr-Mir-73-P3b 
Orthologues Cel-Mir-73-P1 
Node of Origin (locus) C. briggsae
Node of Origin (family) Caenorhabditis
Genome context
(CB4)		 X: 4426903-4426964 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-73-P1a)		 Mir-9-P14 X: 4419753-4419815 [-] Ensembl
Mir-785-P2 X: 4421255-4421318 [+] Ensembl
Mir-73-P2b X: 4426608-4426674 [-] Ensembl
Mir-73-P2a X: 4426739-4426799 [-] Ensembl
Mir-73-P1a X: 4426903-4426964 [-] Ensembl
Mir-2231 X: 4430575-4430638 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UAUAUUCCAGUGAGCGGUCCCUCAAACAACCGAGCUUCCCCGUCAAGCCACAGCUAUCUCUGACAUUGCUGGCAAGAUGUUGGCAGUUCAGUUGUAUGACGGAGACCAAUUUCCUGAUUAAU
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Structure
        10          20        30        40         50        60 
UAUAUUCCAGUGAGCGG--   C   A     C     U  C-|   AA    CA  UAUCUC 
                   UCC UCA ACAAC GAGCU CC  CGUC  GCCA  GC      \
                   AGG AGU UGUUG CUUGA GG  GUAG  CGGU  CG      U
UAAUUAGUCCUUUAACCAG   C   A     A     C  UU^   AA    --  UUACAG 
120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
01 02 03 04 05 06 07 08 09 10 11 12 13 14 15 16 Cb Ea Ma Yo
Star sequence

Cbr-Mir-73-P1a_5p*
mirBase accessionNone
Sequence 
0- CGAGCUUCCCCGUCAAGCCACAGC -24
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Mature sequence

Cbr-Mir-73-P1a_3p
mirBase accessionMIMAT0000482
Sequence 
39- UGGCAAGAUGUUGGCAGUUCAGU -62
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