Mir
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101 microRNA genes with node of origin C. briggsae
Sort by genome coordinates
Motifs
MirGeneDB ID
▲
MiRBase ID
Family
Seed
5p accession
3p accession
Chromosome
Start
End
Strand
Node of origin (locus)
Node of origin (family)
3' NTU
UG
UGUG
CNNC
Cbr-Bantam-P1a
cbr-mir-58a
BANTAM
GAGAUCG
None
MIMAT0000478
IV
9605767
9605840
-
C. briggsae
Protostomia
No
Cbr-Bantam-P1b
cbr-mir-58b
BANTAM
GAGAUCA
None
MIMAT0011482
IV
149584
149644
+
C. briggsae
Protostomia
No
Cbr-Mir-36-o1
cbr-mir-35a
MIR-36
CACCGGG
None
MIMAT0001313
II
8378426
8378486
+
C. briggsae
Protostomia
No
Cbr-Mir-36-o2
cbr-mir-35b-1
MIR-36
CACCGGG
None
MIMAT0011483
X
15371151
15371212
+
C. briggsae
Protostomia
No
Cbr-Mir-36-o3
cbr-mir-35b-2
MIR-36
CACCGGG
None
MIMAT0011483
X
15372046
15372108
+
C. briggsae
Protostomia
No
1
Cbr-Mir-36-o4
cbr-mir-35b-3
MIR-36
CACCGGG
None
MIMAT0011483
X
15372216
15372277
+
C. briggsae
Protostomia
No
1
Cbr-Mir-36-o5
cbr-mir-35b-4
MIR-36
CACCGGG
None
MIMAT0011483
X
15372356
15372417
+
C. briggsae
Protostomia
No
Cbr-Mir-36-o6
cbr-mir-35b-5
MIR-36
CACCGGG
None
MIMAT0011483
X
15372549
15372611
+
C. briggsae
Protostomia
No
1
Cbr-Mir-36-o7a
cbr-mir-35b-6
MIR-36
CACCGGG
None
MIMAT0011483
X
15373330
15373392
+
C. briggsae
Protostomia
No
1
Cbr-Mir-36-o7b
cbr-mir-35b-8
MIR-36
CACCGGG
None
MIMAT0011483
X
15373015
15373077
+
C. briggsae
Protostomia
No
Cbr-Mir-36-o7c
cbr-mir-35b-10
MIR-36
CACCGGG
None
MIMAT0011483
X
15372700
15372762
+
C. briggsae
Protostomia
No
Cbr-Mir-36-o8a
cbr-mir-35b-7
MIR-36
CACCGGG
None
MIMAT0011483
X
15373647
15373709
+
C. briggsae
Protostomia
No
Cbr-Mir-36-o8b
cbr-mir-35b-9
MIR-36
CACCGGG
None
MIMAT0011483
X
15373179
15373241
+
C. briggsae
Protostomia
No
1
Cbr-Mir-36-o8c
cbr-mir-35b-12
MIR-36
CACCGGG
None
MIMAT0011483
X
15372864
15372926
+
C. briggsae
Protostomia
No
1
Cbr-Mir-36-o9
cbr-mir-35b-11
MIR-36
CACCGGG
None
MIMAT0011483
X
15373482
15373545
+
C. briggsae
Protostomia
No
Cbr-Mir-36-o10
cbr-mir-35b-13
MIR-36
CACCGGG
None
MIMAT0011483
X
15373788
15373849
+
C. briggsae
Protostomia
No
Cbr-Mir-36-o11
cbr-mir-35c-1
MIR-36
CACCGGG
None
MIMAT0011467
X
15370852
15370914
+
C. briggsae
Protostomia
No
1
Cbr-Mir-36-o12
cbr-mir-35c-2
MIR-36
CACCGGG
None
MIMAT0011467
X
15375015
15375077
+
C. briggsae
Protostomia
No
Cbr-Mir-36-o13
cbr-mir-35d
MIR-36
CACCGGG
MIMAT0011469
MIMAT0011470
II
8378188
8378247
+
C. briggsae
Protostomia
No
Cbr-Mir-36-o14
cbr-mir-35e
MIR-36
CACCGGG
None
MIMAT0011468
X
15371290
15371352
+
C. briggsae
Protostomia
No
Cbr-Mir-36-o15
cbr-mir-35f
MIR-36
CACCGGG
None
MIMAT0029918
X
15371011
15371072
+
C. briggsae
Protostomia
No
1
Cbr-Mir-36-o16
cbr-mir-35g-1
MIR-36
CACCGGG
None
MIMAT0029919
X
15374480
15374545
+
C. briggsae
Protostomia
No
Cbr-Mir-36-o17
cbr-mir-35g-2
MIR-36
CACCGGG
None
MIMAT0029919
X
15374624
15374686
+
C. briggsae
Protostomia
No
1
Cbr-Mir-36-o18
cbr-mir-35g-3
MIR-36
CACCGGG
None
MIMAT0029919
X
15374070
15374131
+
C. briggsae
Protostomia
No
Cbr-Mir-36-o19
cbr-mir-36
MIR-36
CACCGGG
None
MIMAT0001314
II
8377574
8377633
+
C. briggsae
Protostomia
No
Cbr-Mir-36-o20
cbr-mir-38
MIR-36
CCGGGUU
None
MIMAT0001315
II
8377669
8377736
+
C. briggsae
Protostomia
No
Cbr-Mir-36-o21
cbr-mir-39
MIR-36
CACCGGG
None
MIMAT0001316
II
8377847
8377908
+
C. briggsae
Protostomia
No
Cbr-Mir-36-o22
cbr-mir-40
MIR-36
CACCGGG
None
MIMAT0001317
II
8377946
8378013
+
C. briggsae
Protostomia
No
1
Cbr-Mir-36-o23
cbr-mir-41a
MIR-36
CACCGGG
None
MIMAT0001318
II
8378304
8378369
+
C. briggsae
Protostomia
No
Cbr-Mir-36-o24
cbr-mir-41b
MIR-36
CACCGGG
None
MIMAT0011489
II
8378068
8378133
+
C. briggsae
Protostomia
No
Cbr-Mir-36-o25
cbr-mir-42
MIR-36
CACCGGG
None
MIMAT0000467
II
8891373
8891435
-
C. briggsae
Protostomia
No
Cbr-Mir-36-o26
cbr-mir-7581
MIR-36
AACCAGG
None
MIMAT0029582
X
15378480
15378543
+
C. briggsae
Protostomia
No
Cbr-Mir-54-P1a
cbr-mir-54a
MIR-54
ACCCGUA
MIMAT0011477
MIMAT0011478
X
16963777
16963838
-
C. briggsae
Chromadorea
No
Cbr-Mir-54-P1b-v1
cbr-mir-54b
MIR-54
CGAACCU
None
MIMAT0011494
X
16963615
16963679
-
C. briggsae
Chromadorea
No
Cbr-Mir-54-P1b-v2
cbr-mir-54b
MIR-54
GAACCUG
None
MIMAT0011494
X
16963616
16963678
-
C. briggsae
Chromadorea
No
Cbr-Mir-54-P1c
cbr-mir-54d
MIR-54
ACCCGUA
None
MIMAT0011496
X
16964087
16964152
-
C. briggsae
Chromadorea
No
Cbr-Mir-64-o1
cbr-mir-64c
MIR-64
AUGACAC
MIMAT0029603
None
III
869360
869420
-
C. briggsae
Caenorhabditis
No
Cbr-Mir-64-o2
cbr-mir-64a
MIR-64
AUGACAC
MIMAT0001292
None
III
869227
869290
-
C. briggsae
Caenorhabditis
No
Cbr-Mir-64-o3
cbr-mir-64b
MIR-64
AUGACAC
None
MIMAT0011490
III
869105
869166
-
C. briggsae
Caenorhabditis
No
Cbr-Mir-64-o4
cbr-mir-65
MIR-64
AUGACAC
MIMAT0011484
MIMAT0011485
III
868825
868890
-
C. briggsae
Caenorhabditis
No
Cbr-Mir-73-P1a
cbr-mir-73a
MIR-73
GGCAAGA
None
MIMAT0000482
X
4426903
4426964
-
C. briggsae
Caenorhabditis
No
Cbr-Mir-73-P1b
cbr-mir-73b
MIR-73
GGCAAGA
None
MIMAT0011464
I
6796238
6796300
-
C. briggsae
Caenorhabditis
No
Cbr-Mir-73-P2a
cbr-mir-74b
MIR-73
GGACUUC
MIMAT0011501
MIMAT0011502
X
4426739
4426799
-
C. briggsae
Caenorhabditis
No
Cbr-Mir-73-P2b
cbr-mir-74a
MIR-73
GGCAAGA
None
MIMAT0000483
X
4426608
4426674
-
C. briggsae
Caenorhabditis
No
Cbr-Mir-73-P3a
cbr-mir-2225
MIR-73
GGCAAGA
MIMAT0011497
MIMAT0011498
I
6952728
6952794
-
C. briggsae
Caenorhabditis
No
Cbr-Mir-73-P3b
cbr-mir-2227
MIR-73
GGCAGUG
None
MIMAT0011488
I
6948910
6948966
-
C. briggsae
Caenorhabditis
No
Cbr-Mir-77-P1
cbr-mir-77-1
MIR-77
UCAUCAG
None
MIMAT0000485
II
14398165
14398232
-
C. briggsae
Chromadorea
No
Cbr-Mir-77-P2
cbr-mir-77-2
MIR-77
UCAUCAG
None
MIMAT0000485
II
14395448
14395515
-
C. briggsae
Chromadorea
No
Cbr-Mir-90-P1
cbr-mir-90a
MIR-90
GAUAUGU
None
MIMAT0000493
III
14455369
14455431
+
C. briggsae
Caenorhabditis
No
Cbr-Mir-90-P2
cbr-mir-90b
MIR-90
GAUAUGU
MIMAT0011471
MIMAT0011472
III
14456991
14457056
-
C. briggsae
Caenorhabditis
No
Cbr-Mir-92-o67
cbr-mir-235b
MIR-92
AUUGCAC
MIMAT0011473
MIMAT0011474
I
10817861
10817923
-
C. briggsae
Bilateria
No
1
Cbr-Mir-92-o68
cbr-mir-235a
MIR-92
AUUGCAC
None
MIMAT0004295
I
10817709
10817779
-
C. briggsae
Bilateria
No
1
Cbr-Mir-96-P2p
cbr-mir-790-2
MIR-96
UUGGCAC
MIMAT0004292
None
IV
6048235
6048292
+
C. briggsae
Bilateria
No
1
Cbr-Mir-96-P2q
cbr-mir-790-1
MIR-96
UUGGCAC
MIMAT0004292
None
IV
6048856
6048920
+
C. briggsae
Bilateria
No
Cbr-Mir-124-P9
cbr-mir-124a
MIR-124
AAGGCAC
None
MIMAT0000494
IV
8910174
8910237
+
C. briggsae
Bilateria
No
Cbr-Mir-124-P10
cbr-mir-124c
MIR-124
AAGGCAC
None
MIMAT0029608
X
1609141
1609202
-
C. briggsae
Bilateria
No
Cbr-Mir-124-P11
cbr-mir-124b
MIR-124
AAGGCAC
None
MIMAT0029607
X
1605243
1605305
-
C. briggsae
Bilateria
No
Cbr-Mir-277-P6a
cbr-mir-232-1
MIR-277
AAAUGCA
None
MIMAT0000497
IV
7400660
7400721
+
C. briggsae
Protostomia
No
Cbr-Mir-277-P6b
cbr-mir-232-2
MIR-277
AAAUGCA
None
MIMAT0000497
IV
8370520
8370581
-
C. briggsae
Protostomia
No
Cbr-Mir-279-P11a
cbr-mir-45-1
MIR-279
GACUAGA
None
MIMAT0000470
II
8900359
8900424
-
C. briggsae
Protostomia
No
Cbr-Mir-279-P11b
cbr-mir-45-2
MIR-279
GACUAGA
None
MIMAT0000470
II
8903154
8903219
+
C. briggsae
Protostomia
No
Cbr-Mir-305-P3
cbr-mir-2223
MIR-305
UUGUACU
MIMAT0011492
None
IV
15568456
15568536
-
C. briggsae
Cryptovermes
No
Cbr-Mir-785-P1
cbr-mir-785a
MIR-785
AAGUGAA
None
MIMAT0004286
X
8055330
8055397
+
C. briggsae
Caenorhabditis
No
Cbr-Mir-785-P2
cbr-mir-785b
MIR-785
AAGUGAA
None
MIMAT0029609
X
4421255
4421318
+
C. briggsae
Caenorhabditis
No
Cbr-Mir-2222-P1a
None
MIR-2222
AUCACAG
None
None
X
20535658
20535719
+
C. briggsae
C. briggsae
No
1
Cbr-Mir-2222-P1b
None
MIR-2222
AUCACAG
None
None
X
20537329
20537390
-
C. briggsae
C. briggsae
No
1
Cbr-Mir-2222-P2a
cbr-mir-2222-1
MIR-2222
AUCACAA
None
MIMAT0011487
X
20535807
20535871
+
C. briggsae
C. briggsae
No
Cbr-Mir-2222-P2b
cbr-mir-2222-2
MIR-2222
AUCACAA
None
MIMAT0011487
X
20537177
20537241
-
C. briggsae
C. briggsae
No
Cbr-Mir-2231
cbr-mir-2231
MIR-2231
CCCUGAG
None
MIMAT0029917
X
4430575
4430638
-
C. briggsae
C. briggsae
No
Cbr-Mir-7579
cbr-mir-7579
MIR-7579
GAGGACC
None
MIMAT0029580
V
3694986
3695050
-
C. briggsae
C. briggsae
No
Cbr-Mir-7580-P1
cbr-mir-7580-1
MIR-7580
AACCCAA
None
MIMAT0029581
X
11141279
11141340
+
C. briggsae
C. briggsae
No
Cbr-Mir-7580-P2
cbr-mir-7580-2
MIR-7580
AACCCAA
None
MIMAT0029581
X
11135472
11135533
-
C. briggsae
C. briggsae
No
Cbr-Mir-7583-P1
cbr-mir-7583a
MIR-7583
CAUCCGA
MIMAT0029584
MIMAT0029585
X
16161882
16161939
+
C. briggsae
C. briggsae
No
1
Cbr-Mir-7583-P2
cbr-mir-7583b
MIR-7583
CAUCCGA
None
MIMAT0029586
X
20377604
20377662
+
C. briggsae
C. briggsae
No
Cbr-Mir-7583-P3
cbr-mir-7583c
MIR-7583
GCUGCAA
MIMAT0029593
MIMAT0029594
X
10872909
10872966
+
C. briggsae
C. briggsae
No
Cbr-Mir-7583-P4
cbr-mir-7583d
MIR-7583
GUUGCAA
MIMAT0029591
None
X
20312033
20312090
+
C. briggsae
C. briggsae
No
Cbr-Mir-7584
cbr-mir-7584
MIR-7584
GAGAUAC
MIMAT0029587
None
II
4243495
4243559
-
C. briggsae
C. briggsae
No
Cbr-Mir-7585
cbr-mir-7585
MIR-7585
GAGAUAC
None
MIMAT0029588
I
15397130
15397192
+
C. briggsae
C. briggsae
No
Cbr-Mir-7586
cbr-mir-7586
MIR-7586
GGAAUCC
None
MIMAT0029589
X
14869080
14869141
-
C. briggsae
C. briggsae
No
Cbr-Mir-7587
cbr-mir-7587
MIR-7587
CUAGAAU
MIMAT0029590
None
X
20533902
20533963
+
C. briggsae
C. briggsae
No
Cbr-Mir-7588
cbr-mir-7588
MIR-7588
AAACCGA
None
MIMAT0029592
X
13128472
13128535
+
C. briggsae
C. briggsae
No
Cbr-Mir-7589
cbr-mir-7589
MIR-7589
GGAAAUG
None
MIMAT0029595
X
2057130
2057193
+
C. briggsae
C. briggsae
No
1
Cbr-Mir-7590
cbr-mir-7590
MIR-7590
GGUCUUA
MIMAT0029596
None
V
2734902
2734970
+
C. briggsae
C. briggsae
No
Cbr-Mir-7591-v1
cbr-mir-7591
MIR-7591
AUCGGUA
None
MIMAT0029597
IV
15802497
15802558
+
C. briggsae
C. briggsae
No
Cbr-Mir-7591-v2
cbr-mir-7591
MIR-7591
UCGGUAU
None
MIMAT0029597
IV
15802497
15802558
+
C. briggsae
C. briggsae
No
Cbr-Mir-7593
cbr-mir-7593
MIR-7593
GAGGUAU
None
MIMAT0029599
X
15669654
15669711
-
C. briggsae
C. briggsae
No
Cbr-Mir-7594-P1a
cbr-mir-7594a-1
MIR-7594
GAGGUAG
None
MIMAT0029600
X
11731112
11731174
+
C. briggsae
C. briggsae
No
Cbr-Mir-7594-P1b
cbr-mir-7594a-2
MIR-7594
GAGGUAG
None
MIMAT0029600
X
11722778
11722840
+
C. briggsae
C. briggsae
No
Cbr-Mir-7594-P2a
cbr-mir-7594b-1
MIR-7594
GAGGUAG
None
MIMAT0029601
X
11718111
11718173
+
C. briggsae
C. briggsae
No
Cbr-Mir-7594-P2b
cbr-mir-7594b-2
MIR-7594
GAGGUAG
None
MIMAT0029601
III
10733443
10733505
-
C. briggsae
C. briggsae
No
Cbr-Mir-7595-P1
cbr-mir-7595
MIR-7595
ACCCGUU
MIMAT0029602
None
I
14505055
14505117
-
C. briggsae
C. briggsae
No
Cbr-Mir-7595-P2a
None
MIR-7595
ACCCUAC
None
None
I
14504081
14504142
-
C. briggsae
C. briggsae
No
Cbr-Mir-7595-P2b
None
MIR-7595
ACCCUAC
None
None
III
13565637
13565698
-
C. briggsae
C. briggsae
No
Cbr-Mir-7596
cbr-mir-7596
MIR-7596
GGAAUGG
MIMAT0029604
None
X
1390882
1390938
-
C. briggsae
C. briggsae
No
Cbr-Novel-1
None
CBR-NOVEL-1
UUGAAGU
None
None
I
14504857
14504917
-
C. briggsae
C. briggsae
No
1
Cbr-Novel-2
None
CBR-NOVEL-2
CAGAGAU
None
None
I
14505335
14505393
-
C. briggsae
C. briggsae
No
Cbr-Novel-3
None
CBR-NOVEL-3
GACCACG
None
None
II
5323957
5324011
+
C. briggsae
C. briggsae
No
Cbr-Novel-4
None
CBR-NOVEL-4
GAUACGU
None
None
III
1713454
1713514
-
C. briggsae
C. briggsae
No
Cbr-Novel-5
None
CBR-NOVEL-5
UUGGACU
None
None
IV
11828226
11828286
-
C. briggsae
C. briggsae
No
1
Cbr-Novel-6-P1
None
CBR-NOVEL-6
AAGACAU
None
None
IV
15800970
15801031
-
C. briggsae
C. briggsae
No
Cbr-Novel-6-P2
None
CBR-NOVEL-6
AAGACAU
None
None
IV
15799529
15799590
-
C. briggsae
C. briggsae
No
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