MirGeneDB 3.0

101 microRNA genes with node of origin C. briggsae
Sort by genome coordinates Motifs
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC
Cbr-Bantam-P1a cbr-mir-58a BANTAM GAGAUCG None MIMAT0000478 IV 9605767 9605840 - C. briggsae Protostomia No
Cbr-Bantam-P1b cbr-mir-58b BANTAM GAGAUCA None MIMAT0011482 IV 149584 149644 + C. briggsae Protostomia No
Cbr-Mir-36-o1 cbr-mir-35a MIR-36 CACCGGG None MIMAT0001313 II 8378426 8378486 + C. briggsae Protostomia No
Cbr-Mir-36-o2 cbr-mir-35b-1 MIR-36 CACCGGG None MIMAT0011483 X 15371151 15371212 + C. briggsae Protostomia No
Cbr-Mir-36-o3 cbr-mir-35b-2 MIR-36 CACCGGG None MIMAT0011483 X 15372046 15372108 + C. briggsae Protostomia No 1
Cbr-Mir-36-o4 cbr-mir-35b-3 MIR-36 CACCGGG None MIMAT0011483 X 15372216 15372277 + C. briggsae Protostomia No 1
Cbr-Mir-36-o5 cbr-mir-35b-4 MIR-36 CACCGGG None MIMAT0011483 X 15372356 15372417 + C. briggsae Protostomia No
Cbr-Mir-36-o6 cbr-mir-35b-5 MIR-36 CACCGGG None MIMAT0011483 X 15372549 15372611 + C. briggsae Protostomia No 1
Cbr-Mir-36-o7a cbr-mir-35b-6 MIR-36 CACCGGG None MIMAT0011483 X 15373330 15373392 + C. briggsae Protostomia No 1
Cbr-Mir-36-o7b cbr-mir-35b-8 MIR-36 CACCGGG None MIMAT0011483 X 15373015 15373077 + C. briggsae Protostomia No
Cbr-Mir-36-o7c cbr-mir-35b-10 MIR-36 CACCGGG None MIMAT0011483 X 15372700 15372762 + C. briggsae Protostomia No
Cbr-Mir-36-o8a cbr-mir-35b-7 MIR-36 CACCGGG None MIMAT0011483 X 15373647 15373709 + C. briggsae Protostomia No
Cbr-Mir-36-o8b cbr-mir-35b-9 MIR-36 CACCGGG None MIMAT0011483 X 15373179 15373241 + C. briggsae Protostomia No 1
Cbr-Mir-36-o8c cbr-mir-35b-12 MIR-36 CACCGGG None MIMAT0011483 X 15372864 15372926 + C. briggsae Protostomia No 1
Cbr-Mir-36-o9 cbr-mir-35b-11 MIR-36 CACCGGG None MIMAT0011483 X 15373482 15373545 + C. briggsae Protostomia No
Cbr-Mir-36-o10 cbr-mir-35b-13 MIR-36 CACCGGG None MIMAT0011483 X 15373788 15373849 + C. briggsae Protostomia No
Cbr-Mir-36-o11 cbr-mir-35c-1 MIR-36 CACCGGG None MIMAT0011467 X 15370852 15370914 + C. briggsae Protostomia No 1
Cbr-Mir-36-o12 cbr-mir-35c-2 MIR-36 CACCGGG None MIMAT0011467 X 15375015 15375077 + C. briggsae Protostomia No
Cbr-Mir-36-o13 cbr-mir-35d MIR-36 CACCGGG MIMAT0011469 MIMAT0011470 II 8378188 8378247 + C. briggsae Protostomia No
Cbr-Mir-36-o14 cbr-mir-35e MIR-36 CACCGGG None MIMAT0011468 X 15371290 15371352 + C. briggsae Protostomia No
Cbr-Mir-36-o15 cbr-mir-35f MIR-36 CACCGGG None MIMAT0029918 X 15371011 15371072 + C. briggsae Protostomia No 1
Cbr-Mir-36-o16 cbr-mir-35g-1 MIR-36 CACCGGG None MIMAT0029919 X 15374480 15374545 + C. briggsae Protostomia No
Cbr-Mir-36-o17 cbr-mir-35g-2 MIR-36 CACCGGG None MIMAT0029919 X 15374624 15374686 + C. briggsae Protostomia No 1
Cbr-Mir-36-o18 cbr-mir-35g-3 MIR-36 CACCGGG None MIMAT0029919 X 15374070 15374131 + C. briggsae Protostomia No
Cbr-Mir-36-o19 cbr-mir-36 MIR-36 CACCGGG None MIMAT0001314 II 8377574 8377633 + C. briggsae Protostomia No
Cbr-Mir-36-o20 cbr-mir-38 MIR-36 CCGGGUU None MIMAT0001315 II 8377669 8377736 + C. briggsae Protostomia No
Cbr-Mir-36-o21 cbr-mir-39 MIR-36 CACCGGG None MIMAT0001316 II 8377847 8377908 + C. briggsae Protostomia No
Cbr-Mir-36-o22 cbr-mir-40 MIR-36 CACCGGG None MIMAT0001317 II 8377946 8378013 + C. briggsae Protostomia No 1
Cbr-Mir-36-o23 cbr-mir-41a MIR-36 CACCGGG None MIMAT0001318 II 8378304 8378369 + C. briggsae Protostomia No
Cbr-Mir-36-o24 cbr-mir-41b MIR-36 CACCGGG None MIMAT0011489 II 8378068 8378133 + C. briggsae Protostomia No
Cbr-Mir-36-o25 cbr-mir-42 MIR-36 CACCGGG None MIMAT0000467 II 8891373 8891435 - C. briggsae Protostomia No
Cbr-Mir-36-o26 cbr-mir-7581 MIR-36 AACCAGG None MIMAT0029582 X 15378480 15378543 + C. briggsae Protostomia No
Cbr-Mir-54-P1a cbr-mir-54a MIR-54 ACCCGUA MIMAT0011477 MIMAT0011478 X 16963777 16963838 - C. briggsae Chromadorea No
Cbr-Mir-54-P1b-v1 cbr-mir-54b MIR-54 CGAACCU None MIMAT0011494 X 16963615 16963679 - C. briggsae Chromadorea No
Cbr-Mir-54-P1b-v2 cbr-mir-54b MIR-54 GAACCUG None MIMAT0011494 X 16963616 16963678 - C. briggsae Chromadorea No
Cbr-Mir-54-P1c cbr-mir-54d MIR-54 ACCCGUA None MIMAT0011496 X 16964087 16964152 - C. briggsae Chromadorea No
Cbr-Mir-64-o1 cbr-mir-64c MIR-64 AUGACAC MIMAT0029603 None III 869360 869420 - C. briggsae Caenorhabditis No
Cbr-Mir-64-o2 cbr-mir-64a MIR-64 AUGACAC MIMAT0001292 None III 869227 869290 - C. briggsae Caenorhabditis No
Cbr-Mir-64-o3 cbr-mir-64b MIR-64 AUGACAC None MIMAT0011490 III 869105 869166 - C. briggsae Caenorhabditis No
Cbr-Mir-64-o4 cbr-mir-65 MIR-64 AUGACAC MIMAT0011484 MIMAT0011485 III 868825 868890 - C. briggsae Caenorhabditis No
Cbr-Mir-73-P1a cbr-mir-73a MIR-73 GGCAAGA None MIMAT0000482 X 4426903 4426964 - C. briggsae Caenorhabditis No
Cbr-Mir-73-P1b cbr-mir-73b MIR-73 GGCAAGA None MIMAT0011464 I 6796238 6796300 - C. briggsae Caenorhabditis No
Cbr-Mir-73-P2a cbr-mir-74b MIR-73 GGACUUC MIMAT0011501 MIMAT0011502 X 4426739 4426799 - C. briggsae Caenorhabditis No
Cbr-Mir-73-P2b cbr-mir-74a MIR-73 GGCAAGA None MIMAT0000483 X 4426608 4426674 - C. briggsae Caenorhabditis No
Cbr-Mir-73-P3a cbr-mir-2225 MIR-73 GGCAAGA MIMAT0011497 MIMAT0011498 I 6952728 6952794 - C. briggsae Caenorhabditis No
Cbr-Mir-73-P3b cbr-mir-2227 MIR-73 GGCAGUG None MIMAT0011488 I 6948910 6948966 - C. briggsae Caenorhabditis No
Cbr-Mir-77-P1 cbr-mir-77-1 MIR-77 UCAUCAG None MIMAT0000485 II 14398165 14398232 - C. briggsae Chromadorea No
Cbr-Mir-77-P2 cbr-mir-77-2 MIR-77 UCAUCAG None MIMAT0000485 II 14395448 14395515 - C. briggsae Chromadorea No
Cbr-Mir-90-P1 cbr-mir-90a MIR-90 GAUAUGU None MIMAT0000493 III 14455369 14455431 + C. briggsae Caenorhabditis No
Cbr-Mir-90-P2 cbr-mir-90b MIR-90 GAUAUGU MIMAT0011471 MIMAT0011472 III 14456991 14457056 - C. briggsae Caenorhabditis No
Cbr-Mir-92-o67 cbr-mir-235b MIR-92 AUUGCAC MIMAT0011473 MIMAT0011474 I 10817861 10817923 - C. briggsae Bilateria No 1
Cbr-Mir-92-o68 cbr-mir-235a MIR-92 AUUGCAC None MIMAT0004295 I 10817709 10817779 - C. briggsae Bilateria No 1
Cbr-Mir-96-P2p cbr-mir-790-2 MIR-96 UUGGCAC MIMAT0004292 None IV 6048235 6048292 + C. briggsae Bilateria No 1
Cbr-Mir-96-P2q cbr-mir-790-1 MIR-96 UUGGCAC MIMAT0004292 None IV 6048856 6048920 + C. briggsae Bilateria No
Cbr-Mir-124-P9 cbr-mir-124a MIR-124 AAGGCAC None MIMAT0000494 IV 8910174 8910237 + C. briggsae Bilateria No
Cbr-Mir-124-P10 cbr-mir-124c MIR-124 AAGGCAC None MIMAT0029608 X 1609141 1609202 - C. briggsae Bilateria No
Cbr-Mir-124-P11 cbr-mir-124b MIR-124 AAGGCAC None MIMAT0029607 X 1605243 1605305 - C. briggsae Bilateria No
Cbr-Mir-277-P6a cbr-mir-232-1 MIR-277 AAAUGCA None MIMAT0000497 IV 7400660 7400721 + C. briggsae Protostomia No
Cbr-Mir-277-P6b cbr-mir-232-2 MIR-277 AAAUGCA None MIMAT0000497 IV 8370520 8370581 - C. briggsae Protostomia No
Cbr-Mir-279-P11a cbr-mir-45-1 MIR-279 GACUAGA None MIMAT0000470 II 8900359 8900424 - C. briggsae Protostomia No
Cbr-Mir-279-P11b cbr-mir-45-2 MIR-279 GACUAGA None MIMAT0000470 II 8903154 8903219 + C. briggsae Protostomia No
Cbr-Mir-305-P3 cbr-mir-2223 MIR-305 UUGUACU MIMAT0011492 None IV 15568456 15568536 - C. briggsae Cryptovermes No
Cbr-Mir-785-P1 cbr-mir-785a MIR-785 AAGUGAA None MIMAT0004286 X 8055330 8055397 + C. briggsae Caenorhabditis No
Cbr-Mir-785-P2 cbr-mir-785b MIR-785 AAGUGAA None MIMAT0029609 X 4421255 4421318 + C. briggsae Caenorhabditis No
Cbr-Mir-2222-P1a None MIR-2222 AUCACAG None None X 20535658 20535719 + C. briggsae C. briggsae No 1
Cbr-Mir-2222-P1b None MIR-2222 AUCACAG None None X 20537329 20537390 - C. briggsae C. briggsae No 1
Cbr-Mir-2222-P2a cbr-mir-2222-1 MIR-2222 AUCACAA None MIMAT0011487 X 20535807 20535871 + C. briggsae C. briggsae No
Cbr-Mir-2222-P2b cbr-mir-2222-2 MIR-2222 AUCACAA None MIMAT0011487 X 20537177 20537241 - C. briggsae C. briggsae No
Cbr-Mir-2231 cbr-mir-2231 MIR-2231 CCCUGAG None MIMAT0029917 X 4430575 4430638 - C. briggsae C. briggsae No
Cbr-Mir-7579 cbr-mir-7579 MIR-7579 GAGGACC None MIMAT0029580 V 3694986 3695050 - C. briggsae C. briggsae No
Cbr-Mir-7580-P1 cbr-mir-7580-1 MIR-7580 AACCCAA None MIMAT0029581 X 11141279 11141340 + C. briggsae C. briggsae No
Cbr-Mir-7580-P2 cbr-mir-7580-2 MIR-7580 AACCCAA None MIMAT0029581 X 11135472 11135533 - C. briggsae C. briggsae No
Cbr-Mir-7583-P1 cbr-mir-7583a MIR-7583 CAUCCGA MIMAT0029584 MIMAT0029585 X 16161882 16161939 + C. briggsae C. briggsae No 1
Cbr-Mir-7583-P2 cbr-mir-7583b MIR-7583 CAUCCGA None MIMAT0029586 X 20377604 20377662 + C. briggsae C. briggsae No
Cbr-Mir-7583-P3 cbr-mir-7583c MIR-7583 GCUGCAA MIMAT0029593 MIMAT0029594 X 10872909 10872966 + C. briggsae C. briggsae No
Cbr-Mir-7583-P4 cbr-mir-7583d MIR-7583 GUUGCAA MIMAT0029591 None X 20312033 20312090 + C. briggsae C. briggsae No
Cbr-Mir-7584 cbr-mir-7584 MIR-7584 GAGAUAC MIMAT0029587 None II 4243495 4243559 - C. briggsae C. briggsae No
Cbr-Mir-7585 cbr-mir-7585 MIR-7585 GAGAUAC None MIMAT0029588 I 15397130 15397192 + C. briggsae C. briggsae No
Cbr-Mir-7586 cbr-mir-7586 MIR-7586 GGAAUCC None MIMAT0029589 X 14869080 14869141 - C. briggsae C. briggsae No
Cbr-Mir-7587 cbr-mir-7587 MIR-7587 CUAGAAU MIMAT0029590 None X 20533902 20533963 + C. briggsae C. briggsae No
Cbr-Mir-7588 cbr-mir-7588 MIR-7588 AAACCGA None MIMAT0029592 X 13128472 13128535 + C. briggsae C. briggsae No
Cbr-Mir-7589 cbr-mir-7589 MIR-7589 GGAAAUG None MIMAT0029595 X 2057130 2057193 + C. briggsae C. briggsae No 1
Cbr-Mir-7590 cbr-mir-7590 MIR-7590 GGUCUUA MIMAT0029596 None V 2734902 2734970 + C. briggsae C. briggsae No
Cbr-Mir-7591-v1 cbr-mir-7591 MIR-7591 AUCGGUA None MIMAT0029597 IV 15802497 15802558 + C. briggsae C. briggsae No
Cbr-Mir-7591-v2 cbr-mir-7591 MIR-7591 UCGGUAU None MIMAT0029597 IV 15802497 15802558 + C. briggsae C. briggsae No
Cbr-Mir-7593 cbr-mir-7593 MIR-7593 GAGGUAU None MIMAT0029599 X 15669654 15669711 - C. briggsae C. briggsae No
Cbr-Mir-7594-P1a cbr-mir-7594a-1 MIR-7594 GAGGUAG None MIMAT0029600 X 11731112 11731174 + C. briggsae C. briggsae No
Cbr-Mir-7594-P1b cbr-mir-7594a-2 MIR-7594 GAGGUAG None MIMAT0029600 X 11722778 11722840 + C. briggsae C. briggsae No
Cbr-Mir-7594-P2a cbr-mir-7594b-1 MIR-7594 GAGGUAG None MIMAT0029601 X 11718111 11718173 + C. briggsae C. briggsae No
Cbr-Mir-7594-P2b cbr-mir-7594b-2 MIR-7594 GAGGUAG None MIMAT0029601 III 10733443 10733505 - C. briggsae C. briggsae No
Cbr-Mir-7595-P1 cbr-mir-7595 MIR-7595 ACCCGUU MIMAT0029602 None I 14505055 14505117 - C. briggsae C. briggsae No
Cbr-Mir-7595-P2a None MIR-7595 ACCCUAC None None I 14504081 14504142 - C. briggsae C. briggsae No
Cbr-Mir-7595-P2b None MIR-7595 ACCCUAC None None III 13565637 13565698 - C. briggsae C. briggsae No
Cbr-Mir-7596 cbr-mir-7596 MIR-7596 GGAAUGG MIMAT0029604 None X 1390882 1390938 - C. briggsae C. briggsae No
Cbr-Novel-1 None CBR-NOVEL-1 UUGAAGU None None I 14504857 14504917 - C. briggsae C. briggsae No 1
Cbr-Novel-2 None CBR-NOVEL-2 CAGAGAU None None I 14505335 14505393 - C. briggsae C. briggsae No
Cbr-Novel-3 None CBR-NOVEL-3 GACCACG None None II 5323957 5324011 + C. briggsae C. briggsae No
Cbr-Novel-4 None CBR-NOVEL-4 GAUACGU None None III 1713454 1713514 - C. briggsae C. briggsae No
Cbr-Novel-5 None CBR-NOVEL-5 UUGGACU None None IV 11828226 11828286 - C. briggsae C. briggsae No 1
Cbr-Novel-6-P1 None CBR-NOVEL-6 AAGACAU None None IV 15800970 15801031 - C. briggsae C. briggsae No
Cbr-Novel-6-P2 None CBR-NOVEL-6 AAGACAU None None IV 15799529 15799590 - C. briggsae C. briggsae No

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