MirGeneDB 3.0
MirGeneDB ID

Cbr-Mir-2222-P1b

Family name MIR-2222 (all species)
Seed AUCACAG
Species Roundworm (Caenorhabditis briggsae)
MiRBase ID
Paralogues Cbr-Mir-2222-P1a  Cbr-Mir-2222-P2a  Cbr-Mir-2222-P2b 
Orthologues
Node of Origin (locus) C. briggsae
Node of Origin (family) C. briggsae
Genome context
(CB4)		 X: 20537329-20537390 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-2222-P1b)		 Mir-7587 X: 20533902-20533963 [+] Ensembl
Mir-2222-P2a X: 20535807-20535871 [+] Ensembl
Mir-2222-P2b X: 20537177-20537241 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AGAUAUUGGACCGAUCUCAGUACGACCUGCCCUUGAUCUUUGUUUUCUGAGAUUUUCUAGAGCUCGAAAAUAUCACAGCAAAGAUUGAGCGCAGGUCCACUGGGACCCAACAAUCCUACUGU
Get precursor sequence
Structure
        10           20        30        40        50        60  
AGAUAUUGGACCGAUCU---|   AC       C  UG       UUUU   A   UUUCUAGA 
                    CAGU  GACCUGC CU  AUCUUUG    CUG GAU        G
                    GUCA  CUGGACG GA  UAGAAAC    GAC CUA        C
UGUCAUCCUAACAACCCAGG^   C-       C  GU       ----   A   UAAAAGCU 
120       110       100         90        80            70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ea Ma Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Yo Yo
Star sequence

Cbr-Mir-2222-P1b_5p*
mirBase accessionNone
Sequence 
0- CCUUGAUCUUUGUUUUCUGAGAUU -24
Get sequence
Mature sequence

Cbr-Mir-2222-P1b_3p
mirBase accessionNone
Sequence 
40- UAUCACAGCAAAGAUUGAGCGC -62
Get sequence