MirGeneDB ID | Cbr-Mir-7583-P3 |
Family name |
MIR-7583 (all species) |
Seed |
GCUGCAA |
Species |
Roundworm (Caenorhabditis briggsae) |
MiRBase ID |
cbr-mir-7583c
|
Paralogues |
Cbr-Mir-7583-P1
Cbr-Mir-7583-P2
Cbr-Mir-7583-P4
|
Orthologues |
|
Node of Origin (locus) |
C. briggsae
|
Node of Origin (family) |
C. briggsae
|
Genome context (CB4) |
X: 10872909-10872966 [+]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CUUGAUCUGCUUGAUGAACAAAACGUCGUCAGCUGCAAAAGUCGUGGUGGCAUCACAAGUUGUCUUGCCAUCCGACAUUUGUGGUUGACGAUGCGUCAAGUAGAUUAUCGAAAAAUGU
Get precursor sequence
|
Structure | 10 20 30 40 50
CUUGAUCUGCUUGAUGAACAAAA--| UG A U AUCACAA
CGUCGUCAGC CAAA GUCG GGUGGC \
GUAGCAGUUG GUUU CAGC CUACCG G
UGUAAAAAGCUAUUAGAUGAACUGC^ GU A - UUCUGUU
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
Ea |
Ma |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Yo |
Yo |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Mature sequence |
Cbr-Mir-7583-P3_5p |
mirBase accession | MIMAT0029593 |
Sequence |
0- AGCUGCAAAAGUCGUGGUGGC -21
Get sequence
|
Co-mature sequence |
Cbr-Mir-7583-P3_3p |
mirBase accession | MIMAT0029594 |
Sequence |
37- CCAUCCGACAUUUGUGGUUGA -58
Get sequence
|