| MirGeneDB ID | Cbr-Mir-7583-P2 |
|---|
| Family name |
MIR-7583 (all species) |
|---|
| Seed |
CAUCCGA |
|---|
| Species |
Roundworm (Caenorhabditis briggsae) |
|---|
| MiRBase ID |
cbr-mir-7583b
|
|---|
| Paralogues |
Cbr-Mir-7583-P1
Cbr-Mir-7583-P3
Cbr-Mir-7583-P4
|
|---|
| Orthologues |
|
|---|
| Node of Origin (locus) |
C. briggsae
|
|---|
| Node of Origin (family) |
C. briggsae
|
|---|
Genome context
(CB4) |
X: 20377604-20377662 [+]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
GUUGAUCUGCUUGAUAAAUAACGUUUUGUCAGUCACAAAUAUCGUGAUGGCAUUGAAAGGCAUCAUUGCCAUCCGACAUUUGUGGUUGACGAUGUGAUUUUUUUCAAUUUGCAAUUUUU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GUUGAUCUGCUUGAUAAAUAA--| UU GU A U UUGAAA
CG UUGUCA CACAAAU UCG GAUGGCA G
GU AGCAGU GUGUUUA AGC CUACCGU G
UUUUUAACGUUUAACUUUUUUUA^ GU UG C - UACUAC
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
| Ea |
Ma |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Yo |
Yo |
| |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|---|
| Star sequence |
Cbr-Mir-7583-P2_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- AGUCACAAAUAUCGUGAUGGCA -22
Get sequence
|
|---|
| Mature sequence |
Cbr-Mir-7583-P2_3p |
| mirBase accession | MIMAT0029586 |
|---|
| Sequence |
38- CCAUCCGACAUUUGUGGUUGA -59
Get sequence
|
|---|
