| MirGeneDB ID | Cbr-Mir-7583-P1 |
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| Family name |
MIR-7583 (all species) |
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| Seed |
CAUCCGA |
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| Species |
Roundworm (Caenorhabditis briggsae) |
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| MiRBase ID |
cbr-mir-7583a
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| Paralogues |
Cbr-Mir-7583-P2
Cbr-Mir-7583-P3
Cbr-Mir-7583-P4
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| Orthologues |
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| Node of Origin (locus) |
C. briggsae
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| Node of Origin (family) |
C. briggsae
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Genome context
(CB4) |
X: 16161882-16161939 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AAUAACGUUAUUUGCAUGGUAAACGUCGUCAGUUGCAAAUAUCGUGGUGGCAUUACAAGUAGUCUUGCCAUCCGAAAUUUGUGAUUGACGAUGUAUCAUGUAGAUUAUUGAAAGAAUU
Get precursor sequence
|
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| Structure | 10 20 30 40 50
AAUAACGUUAUUUGCAU----| AA UG A U UUACAA
GGU ACGUCGUCAGU CAAAU UCG GGUGGCA \
CUA UGUAGCAGUUA GUUUA AGC CUACCGU G
UUAAGAAAGUUAUUAGAUGUA^ -- GU A - UCUGAU
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | UG at 5p(-14) |
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Tissue expression
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| Ea |
Ma |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Yo |
Yo |
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| Star sequence |
Cbr-Mir-7583-P1_5p* |
| mirBase accession | MIMAT0029584 |
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| Sequence |
0- AGUUGCAAAUAUCGUGGUGGCA -22
Get sequence
|
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| Mature sequence |
Cbr-Mir-7583-P1_3p |
| mirBase accession | MIMAT0029585 |
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| Sequence |
37- CCAUCCGAAAUUUGUGAUUGA -58
Get sequence
|
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