| MirGeneDB ID | Cbr-Novel-2 |
|---|
| Family name |
CBR-NOVEL-2 (all species) |
|---|
| Seed |
CAGAGAU |
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| Species |
Roundworm (Caenorhabditis briggsae) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
C. briggsae
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| Node of Origin (family) |
C. briggsae
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Genome context
(CB4) |
I: 14505335-14505393 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UCAGGUACAGUUUAAGGGCGAUUUGCCUGUUCAGAGAUGUAGUGUCUUGAUGUUCGAAGUUCCUAACAUCAAGUGGUACAUCACUGAGCAGGCUUUAAGCCUACCUAUUUUUUAAAAAU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UCAGGUACAGUUUAAGG--| GAUUU A G U UCGAA
GC GCCUGUUCAG GAUGUA UG CUUGAUGU G
CG CGGACGAGUC CUACAU GU GAACUACA U
UAAAAAUUUUUUAUCCAUC^ AAUUU A G - AUCCU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
| Ea |
Ma |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Yo |
Yo |
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| Mature sequence |
Cbr-Novel-2_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UCAGAGAUGUAGUGUCUUGAUGU -23
Get sequence
|
|---|
| Co-mature sequence |
Cbr-Novel-2_3p |
| mirBase accession | None |
|---|
| Sequence |
37- AUCAAGUGGUACAUCACUGAGC -59
Get sequence
|
|---|
