MirGeneDB 3.0
MirGeneDB ID

Cbr-Mir-77-P1

Family name MIR-77 (all species)
Seed UCAUCAG
Species Roundworm (Caenorhabditis briggsae)
MiRBase ID cbr-mir-77-1
Paralogues Cbr-Mir-77-P2 
Orthologues Asu-Mir-77  Cel-Mir-77 
Node of Origin (locus) C. briggsae
Node of Origin (family) Chromadorea
Genome context
(CB4)		 II: 14398165-14398232 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-77-P1)		 Mir-77-P2 II: 14395448-14395515 [-] Ensembl
Mir-77-P1 II: 14398165-14398232 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AAGUCGAAAUUCCAAAGAGCUGUGAAUUUGGAUAGCUGUGCUCUGAGGAAAUAACAAUAGUCACACCCCAUGUCAUUUCAUCAGGCCAUAGCUGUCCAAAUUUCUCGGUUCGCAUGUUUUUAAUUUUU
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Structure
        10         20         30        40        50        60   
AAGUCGAAAUUCCAAAG-     U-|                CU    G     AACAAUAGUC 
                  AGCUG  GAAUUUGGAUAGCUGUG  CUGA GAAAU          A
                  UUGGC  UUUAAACCUGUCGAUAC  GACU CUUUA          C
UUUUUAAUUUUUGUACGC     UC^                CG    A     CUGUACCCCA 
      120       110       100        90        80        70
Deep sequencing
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CommentThere is a second Drosha cut +2 on the 5p arm.
3' NTU No
MotifsNo
Tissue expression
-   +
Ea Ma Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Yo Yo
Star sequence

Cbr-Mir-77-P1_5p*
mirBase accessionNone
Sequence 
0- GAUAGCUGUGCUCUGAGGAAAU -22
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Mature sequence

Cbr-Mir-77-P1_3p
mirBase accessionMIMAT0000485
Sequence 
46- UUCAUCAGGCCAUAGCUGUCCA -68
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