| MirGeneDB ID | Cbr-Mir-7589 |
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| Family name |
MIR-7589 (all species) |
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| Seed |
GGAAAUG |
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| Species |
Roundworm (Caenorhabditis briggsae) |
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| MiRBase ID |
cbr-mir-7589
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
C. briggsae
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| Node of Origin (family) |
C. briggsae
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Genome context
(CB4) |
X: 2057130-2057193 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GCUAAGAAGAAGCACGCCGAUGAUGCAAAGGUAAGAUUCCUUCAUUUCAUCCAAAAAGUUGGUUGAAUUAUUUGGAAAUGGAGAAAUCUUACAGGCCCAGACAGCGCUCGUCAGCUCCGUUCUC
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
GCUAAGAAGAAGCACGCCGAUGAU----| AAAG C UCA AAGUUGG
GC GUAAGAUU CUUCAUU UCCAAA \
CG CAUUCUAA GAGGUAA AGGUUU U
CUCUUGCCUCGACUGCUCGCGACAGACC^ GA-- A --- AUUAAGU
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Ea |
Ma |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Yo |
Yo |
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| Star sequence |
Cbr-Mir-7589_5p* |
| mirBase accession | None |
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| Sequence |
0- GUAAGAUUCCUUCAUUUCAUCCAAA -25
Get sequence
|
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| Mature sequence |
Cbr-Mir-7589_3p |
| mirBase accession | MIMAT0029595 |
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| Sequence |
42- UGGAAAUGGAGAAAUCUUACAG -64
Get sequence
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