MirGeneDB 3.0
MirGeneDB ID

Cbr-Mir-90-P1

Family name MIR-90 (all species)
Seed GAUAUGU
Species Roundworm (Caenorhabditis briggsae)
MiRBase ID cbr-mir-90a
Paralogues Cbr-Mir-90-P2 
Orthologues Cel-Mir-90 
Node of Origin (locus) C. briggsae
Node of Origin (family) Caenorhabditis
Genome context
(CB4)		 III: 14455369-14455431 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-90-P1)		 Bantam-P2 III: 14440888-14440953 [-] Ensembl
Mir-238 III: 14445088-14445154 [-] Ensembl
Mir-90-P1 III: 14455369-14455431 [+] Ensembl
Mir-90-P2 III: 14456991-14457056 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UUGGUCCACAUGUCCGCACUCAUUUCAAGCGGCUUUCAACGACUAUAUCAACCAAAUCAAGCUAGAUACGUUGAUAUGUUGUUUGAAUGCCCCUUGAGAUUUUGGAGUGUUCACUUUUUUUGA
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Structure
        10        20          30         40        50        60 
UUGGUCCACAUGUCCGCACUC--        C   U   -|     U        CAAAUCAA 
                       AUUUCAAG GGC UUC AACGAC AUAUCAAC        \
                       UAGAGUUC CCG AAG UUGUUG UAUAGUUG        G
AGUUUUUUUCACUUGUGAGGUUU        C   U   U^     -        CAUAGAUC 
 120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Ea Ma Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Yo Yo
Star sequence

Cbr-Mir-90-P1_5p*
mirBase accessionNone
Sequence 
0- GGCUUUCAACGACUAUAUCAAC -22
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Mature sequence

Cbr-Mir-90-P1_3p
mirBase accessionMIMAT0000493
Sequence 
41- UGAUAUGUUGUUUGAAUGCCCC -63
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