MirGeneDB 3.0
MirGeneDB ID

Cbr-Mir-7580-P1

Family name MIR-7580 (all species)
Seed AACCCAA
Species Roundworm (Caenorhabditis briggsae)
MiRBase ID cbr-mir-7580-1
Paralogues Cbr-Mir-7580-P2 
Orthologues
Node of Origin (locus) C. briggsae
Node of Origin (family) C. briggsae
Genome context
(CB4)		 X: 11141279-11141340 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-7580-P1)		 Mir-230 X: 11132721-11132785 [+] Ensembl
Mir-7580-P2 X: 11135472-11135533 [-] Ensembl
Mir-7580-P1 X: 11141279-11141340 [+] Ensembl
Mir-791 X: 11146148-11146211 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UUUUUACCAAAAAUUUGGAAAGUUCCUUUCAGCCACUUCGGUUGUGGUUAUACAAACAGAAGUUGAUAUAACCCAAUCACGAAAAUGGCUGAUGGUGAUGUGUGUUGUUCAUAUUCAUGGUA
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Structure
        10        20          30         40          50         
UUUUUACCAAAAAUUUGGAAA--  UC  U       C-    --|   U       CAAACA 
                       GU  CU UCAGCCA  UUCG  GUUG GGUUAUA      G
                       UA  GG AGUCGGU  AAGC  UAAC CCAAUAU      A
AUGGUACUUAUACUUGUUGUGUG  GU  U       AA    AC^   -       AGUUGA 
120       110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Ea Ma Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Yo Yo
Star sequence

Cbr-Mir-7580-P1_5p*
mirBase accessionNone
Sequence 
0- AGCCACUUCGGUUGUGGUUAUA -22
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Mature sequence

Cbr-Mir-7580-P1_3p
mirBase accessionMIMAT0029581
Sequence 
38- UAACCCAAUCACGAAAAUGGCUGA -62
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