MirGeneDB 2.1
MirGeneDB ID

Cbr-Mir-124-P11

Family name MIR-124 (all species)
Seed AAGGCAC
Species Roundworm (Caenorhabditis briggsae)
MiRBase ID cbr-mir-124c
Paralogues Cbr-Mir-124-P10  Cbr-Mir-124-P12 
Orthologues Aae-Mir-124  Asu-Mir-124  Bfl-Mir-124  Bge-Mir-124  Bla-Mir-124  Cel-Mir-124  Cte-Mir-124  Dan-Mir-124  Dma-Mir-124  Dme-Mir-124  Dmo-Mir-124  Dpu-Mir-124  Dsi-Mir-124  Dya-Mir-124  Esc-Mir-124  Hme-Mir-124  Isc-Mir-124  Lan-Mir-124  Npo-Mir-124  Obi-Mir-124  Ovu-Mir-124  Pfl-Mir-124  Pmi-Mir-124  Sko-Mir-124  Spu-Mir-124  Tca-Mir-124  Xbo-Mir-124 
Node of Origin (locus) C. briggsae
Node of Origin (family) Bilateria
Genome context
(CB4)		 X: 1609141-1609202 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-124-P11)		 Mir-124-P12 X: 1605243-1605305 [-] Ensembl
Mir-124-P11 X: 1609141-1609202 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UGAAUAUUUUCUCAUCGUUGCUUAGUGUGCACGGCAUUGGCAGUGACCUUAAUAGAGAACAGUCAACUCAUUAAGGCACUUCCAAGCCGUACACAAACAUUGCAACGCAAAUUAUGUCUUUG
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Structure
        10        20          30        40        50        60 
UGAAUAUUUUCUCAUCGU   UUAG--|   C     A    C    A       AGAGAAC 
                  UGC      UGUG ACGGC UUGG AGUG CCUUAAU       A
                  ACG      ACAC UGCCG AACC UCAC GGAAUUA       G
GUUUCUGUAUUAAACGCA   UUACAA^   A     -    U    -       CUCAACU 
120       110       100        90         80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
01 02 03 04 05 06 07 08 09 10 11 12 13 14 15 16 Cb Ea Ma Yo
Star sequence

Cbr-Mir-124-P11_5p*
mirBase accessionNone
Sequence 
0- ACGGCAUUGGCAGUGACCUUAAU -23
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Mature sequence

Cbr-Mir-124-P11_3p
mirBase accessionMIMAT0029608
Sequence 
41- UAAGGCACUUCCAAGCCGUAC -62
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