Mir-124-P11

MirGeneDB ID

Cbr-Mir-124-P11

Family name

MIR-124 (all species)

Seed

AAGGCAC

Species

Roundworm (Caenorhabditis briggsae)

MiRBase ID

cbr-mir-124b

Paralogues

Cbr-Mir-124-P9 Cbr-Mir-124-P10

Orthologues

Aae-Mir-124 Aga-Mir-124 Agr-Mir-124 Asu-Mir-124 Bfl-Mir-124 Bge-Mir-124 Bko-Mir-124 Bla-Mir-124 Bpl-Mir-124 Cel-Mir-124 Cte-Mir-124 Dan-Mir-124 Dlo-Mir-124 Dma-Mir-124 Dme-Mir-124 Dmo-Mir-124 Dpu-Mir-124 Dsi-Mir-124 Dya-Mir-124 Eba-Mir-124 Esc-Mir-124 Gpa-Mir-124 Gsp-Mir-124 Hme-Mir-124 Hru-Mir-124 Isc-Mir-124 Lan-Mir-124 Lhy-Mir-124 Llo-Mir-124 Mgi-Mir-124 Mom-Mir-124 Npo-Mir-124 Obi-Mir-124 Ofu-Mir-124 Ovu-Mir-124 Pau-Mir-124 Pdu-Mir-124 Pfl-Mir-124 Pmi-Mir-124 Pve-Mir-124 Sko-Mir-124 Sma-Mir-124 Sne-Mir-124 Snu-Mir-124 Spu-Mir-124 Sro-Mir-124 Tca-Mir-124 War-Mir-124 Xbo-Mir-124

Node of Origin (locus)

C. briggsae

Node of Origin (family)

Bilateria

Genome context
(CB4)

X: 1605243-1605305 [-] Ensembl

Clustered miRNAs
(< 50kb from Mir-124-P11)

Mir-124-P11 X: 1605243-1605305 [-] Ensembl
Mir-124-P10 X: 1609141-1609202 [-] Ensembl

Precursor
(pre-Mir +30nt flank)

ACUAUUGGAAAUGAUGGUUGAUAUAUGUAUACAGAGUUUGUCGUUGCGUUUAAUUAGGAACAGAACCAAAUUAAGGCACGCCUAACUCUGUCUACAUGUACUUUUACAAGAGUUAGACCAGUA

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Structure

        10        20          30        40        50        60  
ACUAUUGGAAAUGAUGGUUGA--|       U        UGU   U  G      UAGGAAC 
                       UAUAUGUA ACAGAGUU   CGU GC UUUAAU       \
                       AUGUACAU UGUCUCAA   GCA CG GAAUUA       A
AUGACCAGAUUGAGAACAUUUUC^       C        UCC   -  -      AACCAAG 
 120       110       100        90        80          70

Deep sequencing

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3' NTU

Motifs

Tissue expression

Ea	Ma	Wh	Wh	Wh	Wh	Wh	Wh	Wh	Wh	Wh	Wh	Wh	Wh	Wh	Wh	Wh	Wh	Yo	Yo

Star sequence

Cbr-Mir-124-P11_5p*

mirBase accession

None

Sequence

0- ACAGAGUUUGUCGUUGCGUUUAAU -24

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Mature sequence

Cbr-Mir-124-P11_3p

mirBase accession

MIMAT0029607

Sequence

41- UAAGGCACGCCUAACUCUGUCU -63

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